RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 TNPO2O14787 897 aaKnown RBP14.53□□□□□ -0.08
SRSF1-204ENST00000581979 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 DEXIO95424 95 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 GH2P01242 217 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 TOP1P11387 765 aaKnown RBP14.53□□□□□ -0.08
SRSF1-204ENST00000581979 RESTQ13127 1097 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 IRF5Q13568 498 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 TRIM29Q14134 588 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 CERKLQ49MI3 558 aaPredicted RBP14.53□□□□□ -0.08
SRSF1-204ENST00000581979 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 MAP3K14Q99558 947 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.53□□□□□ -0.08
SRSF1-204ENST00000581979 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
SRSF1-204ENST00000581979 IGKV6D-41A0A0C4DH26 115 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 PRPF40AO75400 957 aaKnown RBP14.52□□□□□ -0.08
SRSF1-204ENST00000581979 MYCP01106 439 aaPredicted RBP14.52□□□□□ -0.08
SRSF1-204ENST00000581979 FLT3LGP49771 235 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 DNM1Q05193 864 aaKnown RBP14.52□□□□□ -0.08
SRSF1-204ENST00000581979 GRM4Q14833 912 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 MTFR1Q15390 333 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 RGS22Q8NE09 1264 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 PXYLP1Q8TE99 480 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 AIFM3Q96NN9 605 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 RNF26Q9BY78 433 aaPredicted RBP14.52□□□□□ -0.08
SRSF1-204ENST00000581979 MTMR4Q9NYA4 1195 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 MORF4L1Q9UBU8 362 aa14.52□□□□□ -0.08
SRSF1-204ENST00000581979 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 TRAK2O60296 914 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 NOVP48745 357 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 FBXO18Q8NFZ0 1043 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 COA7Q96BR5 231 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
SRSF1-204ENST00000581979 TTLL1O95922 423 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 GNAQP50148 359 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 KRT85P78386 507 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
SRSF1-204ENST00000581979 ABCB5Q2M3G0 1257 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 SKOR2Q2VWA4 1001 aaPredicted RBP14.51□□□□□ -0.09
SRSF1-204ENST00000581979 USP17L2Q6R6M4 530 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 C12orf42Q96LP6 360 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
SRSF1-204ENST00000581979 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 LMBRD1Q9NUN5 540 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 CLIP2Q9UDT6 1046 aa14.51□□□□□ -0.09
SRSF1-204ENST00000581979 CNTNAP5Q8WYK1 1306 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 PRPF3O43395 683 aaKnown RBP14.5□□□□□ -0.09
SRSF1-204ENST00000581979 FIBPO43427 364 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 ADCY3O60266 1144 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 GJB1P08034 283 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 CCL5P13501 91 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 GUCY1A2P33402 732 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 UBXN2AP68543 259 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 KRT40Q6A162 431 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 FAM173BQ6P4H8 233 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
SRSF1-204ENST00000581979 GJB4Q9NTQ9 266 aa14.5□□□□□ -0.09
SRSF1-204ENST00000581979 GJA8P48165 433 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 HERVK_113P62684 666 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 FUT2Q10981 343 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 CLEC10AQ8IUN9 316 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 LRRC47Q8N1G4 583 aaKnown RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 KIAA1683Q9H0B3 1180 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 CABP5Q9NP86 173 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 BIN2Q9UBW5 565 aaPredicted RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 MAD2L2Q9UI95 211 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 V9GY48 417 aaPredicted RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 PARP1P09874 1014 aaKnown RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 ELNP15502 786 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 XBP1P17861 261 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 USP14P54578 494 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 GNL2Q13823 731 aaKnown RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 TMEM179Q6ZVK1 233 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 GTF3C2Q8WUA4 911 aaPredicted RBP14.49□□□□□ -0.09
SRSF1-204ENST00000581979 SHISA4Q96DD7 197 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 RNF208Q9H0X6 261 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 GJD2Q9UKL4 321 aa14.49□□□□□ -0.09
SRSF1-204ENST00000581979 hCG_1642624A0A1W2PR95 340 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 PALM3A6NDB9 673 aaPredicted RBP14.48□□□□□ -0.09
SRSF1-204ENST00000581979 GPRC5AQ8NFJ5 357 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 LZTS2Q9BRK4 669 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 KANSL2Q9H9L4 492 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 TXNRD2Q9NNW7 524 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
SRSF1-204ENST00000581979 RBPJLQ9UBG7 517 aa14.48□□□□□ -0.09
SRSF1-204ENST00000581979 DDX49Q9Y6V7 483 aaKnown RBP14.48□□□□□ -0.09
SRSF1-204ENST00000581979 INHAP05111 366 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 SEPT2Q15019 361 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 SAFBQ15424 915 aaKnown RBP eCLIP14.47□□□□□ -0.09
SRSF1-204ENST00000581979 POTEEQ6S8J3 1075 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 TMEM87AQ8NBN3 555 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 ACER1Q8TDN7 264 aa14.47□□□□□ -0.09
SRSF1-204ENST00000581979 PIBF1Q8WXW3 757 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms