RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 TMEM67Q5HYA8 995 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 NPLOC4Q8TAT6 608 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 UNC93B1Q9H1C4 597 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 RIPK3Q9Y572 518 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 TAF6LQ9Y6J9 622 aa19.18■□□□□ 0.66
IFT20-210ENST00000580357 POTEFA5A3E0 1075 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 PRC1O43663 620 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 SGPL1O95470 568 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 CATIPQ7Z7H3 387 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 ANKRD35Q8N283 1001 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
IFT20-210ENST00000580357 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 TRERF1Q96PN7 1200 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 NEK1Q96PY6 1258 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 MAP3K14Q99558 947 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 MAF1Q9H063 256 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 ACAD9Q9H845 621 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 ZNF536O15090 1300 aa19.17■□□□□ 0.66
IFT20-210ENST00000580357 PLXNB2O15031 1838 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 EN2P19622 333 aaPredicted RBP19.16■□□□□ 0.66
IFT20-210ENST00000580357 LIFRP42702 1097 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 CACNB2Q08289 660 aaPredicted RBP19.16■□□□□ 0.66
IFT20-210ENST00000580357 CCL14Q16627 93 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 ZNF792Q3KQV3 632 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.16■□□□□ 0.66
IFT20-210ENST00000580357 PAK6Q9NQU5 681 aaPredicted RBP19.16■□□□□ 0.66
IFT20-210ENST00000580357 CCPG1Q9ULG6 757 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 WDR19Q8NEZ3 1342 aa19.16■□□□□ 0.66
IFT20-210ENST00000580357 KLRF2D3W0D1 207 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 TFRCP02786 760 aaKnown RBP19.15■□□□□ 0.66
IFT20-210ENST00000580357 GOLGA8HP0CJ92 632 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 ALAS1P13196 640 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 PRKAR2AP13861 404 aaKnown RBP19.15■□□□□ 0.66
IFT20-210ENST00000580357 ANTXR2P58335 489 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 TRAF1Q13077 416 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 CHST3Q7LGC8 479 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 KCNB2Q92953 911 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 MAML3Q96JK9 1138 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 UBA5Q9GZZ9 404 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 RNF146Q9NTX7 359 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 COL11A1P12107 1806 aaPredicted RBP19.15■□□□□ 0.66
IFT20-210ENST00000580357 PFASO15067 1338 aa19.15■□□□□ 0.66
IFT20-210ENST00000580357 DNAJC25-GNG10A0A024R161 153 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 IGHA2P01877 340 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 CALM1P0DP23 149 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 CALM2P0DP24 149 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 CALM3P0DP25 149 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 HSPA4P34932 840 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 DHX32Q7L7V1 743 aaKnown RBP19.14■□□□□ 0.65
IFT20-210ENST00000580357 RASGRP2Q7LDG7 609 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 ZNF467Q7Z7K2 595 aaPredicted RBP19.14■□□□□ 0.65
IFT20-210ENST00000580357 ADGRF4Q8IZF3 695 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 U2AF1L4Q8WU68 220 aaKnown RBP19.14■□□□□ 0.65
IFT20-210ENST00000580357 FLRT1Q9NZU1 646 aa19.14■□□□□ 0.65
IFT20-210ENST00000580357 PALM3A6NDB9 673 aaPredicted RBP19.13■□□□□ 0.65
IFT20-210ENST00000580357 CCDC69A6NI79 296 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 MSCO60682 206 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 PGK2P07205 417 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 KIF5BP33176 963 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 SNAP25P60880 206 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 TRIM32Q13049 653 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 GRM4Q14833 912 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 NFXL1Q6ZNB6 911 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 DEFB118Q96PH6 123 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 LY9Q9HBG7 655 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 HOMER2Q9NSB8 354 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 MAD2L2Q9UI95 211 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 ZNF236Q9UL36 1845 aa19.13■□□□□ 0.65
IFT20-210ENST00000580357 DHX16O60231 1041 aaKnown RBP19.12■□□□□ 0.65
IFT20-210ENST00000580357 DDAH1O94760 285 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 PSMA5P28066 241 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 SMARCA1P28370 1054 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 GNAQP50148 359 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 EXOSC10Q01780 885 aaKnown RBP19.12■□□□□ 0.65
IFT20-210ENST00000580357 TROAPQ12815 778 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 SYNE3Q6ZMZ3 975 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 RGS22Q8NE09 1264 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 TINF2Q9BSI4 451 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 CRISPLD2Q9H0B8 497 aa19.12■□□□□ 0.65
IFT20-210ENST00000580357 ZNFX1Q9P2E3 1918 aaKnown RBP19.12■□□□□ 0.65
IFT20-210ENST00000580357 HTTP42858 3142 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 POTEB2H3BUK9 544 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 SH2B2O14492 632 aaPredicted RBP19.11■□□□□ 0.65
IFT20-210ENST00000580357 CYP2C19P33261 490 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 MAMDC4Q6UXC1 1216 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 ANKLE1Q8NAG6 615 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 CTCFLQ8NI51 663 aaPredicted RBP19.11■□□□□ 0.65
IFT20-210ENST00000580357 LZTS2Q9BRK4 669 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 VAT1LQ9HCJ6 419 aa19.11■□□□□ 0.65
IFT20-210ENST00000580357 SYNGAP1Q96PV0 1343 aa19.1■□□□□ 0.65
IFT20-210ENST00000580357 CNGA1P29973 690 aa19.1■□□□□ 0.65
IFT20-210ENST00000580357 CDC37Q16543 378 aaPredicted RBP19.1■□□□□ 0.65
IFT20-210ENST00000580357 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
IFT20-210ENST00000580357 FBXO11Q86XK2 927 aa19.1■□□□□ 0.65
IFT20-210ENST00000580357 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
IFT20-210ENST00000580357 STAG2Q8N3U4 1231 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms