RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SLFNL1Q499Z3 407 aa23.2■■□□□ 1.3
LIMD2-209ENST00000580222 KHSRPQ92945 711 aaKnown RBP eCLIP23.2■■□□□ 1.3
LIMD2-209ENST00000580222 UPF3AQ9H1J1 476 aaKnown RBP23.2■■□□□ 1.3
LIMD2-209ENST00000580222 TCF20Q9UGU0 1960 aaKnown RBP23.2■■□□□ 1.3
LIMD2-209ENST00000580222 TCRBV5S4A2TA0A5A2 114 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 IFIT2P09913 472 aaKnown RBP23.19■■□□□ 1.3
LIMD2-209ENST00000580222 GJA9P57773 515 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 ACVR2BQ13705 512 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 GNASQ5JWF2 1037 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 FAM83BQ5T0W9 1011 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 SLC9C2Q5TAH2 1124 aa23.19■■□□□ 1.3
LIMD2-209ENST00000580222 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
LIMD2-209ENST00000580222 PTGS1P23219 599 aa23.18■■□□□ 1.3
LIMD2-209ENST00000580222 CCDC144BQ3MJ40 725 aa23.18■■□□□ 1.3
LIMD2-209ENST00000580222 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
LIMD2-209ENST00000580222 MSL3Q8N5Y2 521 aaKnown RBP23.18■■□□□ 1.3
LIMD2-209ENST00000580222 NUP88Q99567 741 aaPredicted RBP23.18■■□□□ 1.3
LIMD2-209ENST00000580222 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.18■■□□□ 1.3
LIMD2-209ENST00000580222 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
LIMD2-209ENST00000580222 GRIN2DO15399 1336 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 CDK8P49336 464 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 CCL23P55773 120 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 BEX3Q00994 111 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 KRT40Q6A162 431 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 PCSK9Q8NBP7 692 aaKnown RBP23.17■■□□□ 1.3
LIMD2-209ENST00000580222 SH2D4AQ9H788 454 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 C11orf16Q9NQ32 467 aa23.17■■□□□ 1.3
LIMD2-209ENST00000580222 ERC2O15083 957 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 PPP2R2DQ66LE6 453 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 TMED8Q6PL24 325 aaPredicted RBP23.16■■□□□ 1.3
LIMD2-209ENST00000580222 SLC43A3Q8NBI5 491 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 DDX11Q96FC9 970 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.16■■□□□ 1.3
LIMD2-209ENST00000580222 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 KATNBL1Q9H079 304 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 WNT8AQ9H1J5 351 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 TSPYL2Q9H2G4 693 aaPredicted RBP23.16■■□□□ 1.3
LIMD2-209ENST00000580222 ARIH1Q9Y4X5 557 aaPredicted RBP23.16■■□□□ 1.3
LIMD2-209ENST00000580222 PARP14Q460N5 1801 aa23.16■■□□□ 1.3
LIMD2-209ENST00000580222 ASTN1O14525 1302 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 PIEZO1Q92508 2521 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 EPOPA6NHQ4 379 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 SKIV2LQ15477 1246 aaKnown RBP23.15■■□□□ 1.3
LIMD2-209ENST00000580222 SNRNP48Q6IEG0 339 aaKnown RBP23.15■■□□□ 1.3
LIMD2-209ENST00000580222 CHD1LQ86WJ1 897 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 TRPV6Q9H1D0 765 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 MTCH2Q9Y6C9 303 aa23.15■■□□□ 1.3
LIMD2-209ENST00000580222 COL11A1P12107 1806 aaPredicted RBP23.15■■□□□ 1.3
LIMD2-209ENST00000580222 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.14■■□□□ 1.29
LIMD2-209ENST00000580222 TLR3O15455 904 aaKnown RBP23.14■■□□□ 1.29
LIMD2-209ENST00000580222 TLL1O43897 1013 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 RAD21O60216 631 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 SLC4A3P48751 1232 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 NUCB1Q02818 461 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 CXCL17Q6UXB2 119 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 TEX13BQ9BXU2 312 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 CERS4Q9HA82 394 aa23.14■■□□□ 1.29
LIMD2-209ENST00000580222 NAV1Q8NEY1 1877 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 CHGBP05060 677 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 COPB2P35606 906 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 C12orf60Q5U649 245 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 ZNF467Q7Z7K2 595 aaPredicted RBP23.13■■□□□ 1.29
LIMD2-209ENST00000580222 CCDC17Q96LX7 622 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 NOC4LQ9BVI4 516 aaKnown RBP23.13■■□□□ 1.29
LIMD2-209ENST00000580222 PCDHA11Q9Y5I1 949 aa23.13■■□□□ 1.29
LIMD2-209ENST00000580222 FAM86C2PA6NEL3 165 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 ARHGEF15O94989 841 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 NKX3-2P78367 333 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 TMEM31Q5JXX7 168 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 GPATCH3Q96I76 525 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 ABHD16BQ9H3Z7 469 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 KANSL2Q9H9L4 492 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 HCN4Q9Y3Q4 1203 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 SLC4A7Q9Y6M7 1214 aa23.12■■□□□ 1.29
LIMD2-209ENST00000580222 USP17L12C9JPN9 530 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 USP17L21D6R901 530 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 AAK1Q2M2I8 961 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 C16orf86Q6ZW13 317 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 ARMCX2Q7L311 632 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 CPXCR1Q8N123 301 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 SCLYQ96I15 445 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 SLF1Q9BQI6 1058 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 MTIF3Q9H2K0 278 aaKnown RBP23.11■■□□□ 1.29
LIMD2-209ENST00000580222 SPC25Q9HBM1 224 aa23.11■■□□□ 1.29
LIMD2-209ENST00000580222 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
LIMD2-209ENST00000580222 PRRC2BQ5JSZ5 2229 aaKnown RBP23.1■■□□□ 1.29
LIMD2-209ENST00000580222 GOLIM4O00461 696 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 POU3F3P20264 500 aaPredicted RBP23.1■■□□□ 1.29
LIMD2-209ENST00000580222 CNTN2Q02246 1040 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 TTLL4Q14679 1199 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 TMEM63BQ5T3F8 832 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 CCDC144CPQ8IYA2 1237 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 RAVER2Q9HCJ3 691 aaKnown RBP23.1■■□□□ 1.29
LIMD2-209ENST00000580222 GOPCQ9HD26 462 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 CD320Q9NPF0 282 aa23.1■■□□□ 1.29
LIMD2-209ENST00000580222 B4GALT4O60513 344 aa23.09■■□□□ 1.29
LIMD2-209ENST00000580222 MBD4O95243 580 aa23.09■■□□□ 1.29
LIMD2-209ENST00000580222 CA3P07451 260 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms