RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SDR42E1Q8WUS8 393 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 RIOK1Q9BRS2 568 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CRNKL1Q9BZJ0 848 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GBF1Q92538 1859 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ZNFX1Q9P2E3 1918 aaKnown RBP15.96■□□□□ 0.14
CDK5RAP3-213ENST00000579605 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 GNAI2P04899 355 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TNFAIP2Q03169 654 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ARMCX2Q7L311 632 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 FAM178BQ8IXR5 827 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 NUP88Q99567 741 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TEX13BQ9BXU2 312 aa15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CTDP1Q9Y5B0 961 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ASTN1O14525 1302 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 KIF28PB7ZC32 967 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 DYNC1LI2O43237 492 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CABYRO75952 493 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CYP2C9P11712 490 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ALADP13716 330 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SLFN5Q08AF3 891 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CCDC144CPQ8IYA2 1237 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 GOPCQ9HD26 462 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 DBNLQ9UJU6 430 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-213ENST00000579605 LPXNO60711 386 aa15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ACTN1P12814 892 aa15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 GDPD5Q8WTR4 605 aa15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ANKS1AQ92625 1134 aa15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 FTOQ9C0B1 505 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 UBE2ZQ9H832 354 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ZEB2O60315 1214 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SURF6O75683 361 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 IL9P15248 144 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 KCNA5P22460 613 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TLK2Q86UE8 772 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 FGD4Q96M96 766 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SLC9A7Q96T83 725 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 RAVER2Q9HCJ3 691 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TRMT13Q9NUP7 481 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CYP2D7A0A087X1C5 515 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ZBED4O75132 1171 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 PFKMP08237 780 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CDK8P49336 464 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CNTN2Q02246 1040 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 PHOSPHO2Q8TCD6 241 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 CCDC17Q96LX7 622 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 PHOX2BQ99453 314 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 KATNBL1Q9H079 304 aa15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 ALDH8A1Q9H2A2 487 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 MYO5AQ9Y4I1 1855 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-213ENST00000579605 LCHNA4D1U4 455 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 BCAR3O75815 825 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 NKX3-2P78367 333 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 SLC9C2Q5TAH2 1124 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 PTCRAQ6ISU1 281 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TMCO2Q7Z6W1 182 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 LCORLQ8N3X6 602 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-213ENST00000579605 TRANK1O15050 2925 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 DCXO43602 365 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PRKAB2O43741 272 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SMPD1P17405 629 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 LEXMQ3ZCV2 418 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 TMEM63BQ5T3F8 832 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 KIFC2Q96AC6 838 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ZBED2Q9BTP6 218 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SEZ6LQ9BYH1 1024 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ARMT1Q9H993 441 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ZNF536O15090 1300 aa15.89■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SUPT20HL2P0C7V6 817 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PDE6AP16499 860 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 FAM47CQ5HY64 1035 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 EEPD1Q7L9B9 569 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 KCNH6Q9H252 994 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 TNNQ9UQP3 1299 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 TNKSO95271 1327 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
CDK5RAP3-213ENST00000579605 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-213ENST00000579605 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
CDK5RAP3-213ENST00000579605 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
CDK5RAP3-213ENST00000579605 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
CDK5RAP3-213ENST00000579605 GRXCR2A6NFK2 248 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms