RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-217ENST00000577897 MAML3Q96JK9 1138 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
SREBF1-217ENST00000577897 TANGO6Q9C0B7 1094 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 EPHX3Q9H6B9 360 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 STARD7Q9NQZ5 370 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-217ENST00000577897 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 MYH7P12883 1935 aa16.42■□□□□ 0.22
SREBF1-217ENST00000577897 ACRP10323 421 aa16.41■□□□□ 0.22
SREBF1-217ENST00000577897 BMP1P13497 986 aa16.41■□□□□ 0.22
SREBF1-217ENST00000577897 DDIT3P35638 169 aa16.41■□□□□ 0.22
SREBF1-217ENST00000577897 KCNQ1P51787 676 aa16.41■□□□□ 0.22
SREBF1-217ENST00000577897 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
SREBF1-217ENST00000577897 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-217ENST00000577897 CSF2RAP15509 400 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 PPP4CP60510 307 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 DYNLL1P63167 89 aaKnown RBP16.4■□□□□ 0.22
SREBF1-217ENST00000577897 RAB30Q15771 203 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 IMMTQ16891 758 aaKnown RBP16.4■□□□□ 0.22
SREBF1-217ENST00000577897 CERKLQ49MI3 558 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-217ENST00000577897 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-217ENST00000577897 C16orf59Q7L2K0 433 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 ANKRD33Q7Z3H0 272 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 TOX2Q96NM4 488 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 NEK1Q96PY6 1258 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
SREBF1-217ENST00000577897 TRANK1O15050 2925 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
SREBF1-217ENST00000577897 GNAT2P19087 354 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 ADD2P35612 726 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 FGD1P98174 961 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 COG2Q14746 738 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 AAK1Q2M2I8 961 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 ZNF365Q70YC5 407 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 TTC14Q96N46 770 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 PPP1R12CQ9BZL4 782 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 TBX21Q9UL17 535 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
SREBF1-217ENST00000577897 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
SREBF1-217ENST00000577897 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-217ENST00000577897 RPS6KB1P23443 525 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 USP5P45974 858 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 ACLYP53396 1101 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 AK2P54819 239 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 RASIP1Q5U651 963 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-217ENST00000577897 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 MROH8Q9H579 483 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 SERPINB13Q9UIV8 391 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 MYH1P12882 1939 aa16.38■□□□□ 0.21
SREBF1-217ENST00000577897 WDFY4Q6ZS81 3184 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 SMCHD1A6NHR9 2005 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-217ENST00000577897 FCER1AP12319 257 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 AKR1A1P14550 325 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 MCM4P33991 863 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-217ENST00000577897 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
SREBF1-217ENST00000577897 YBX2Q9Y2T7 364 aaKnown RBP16.37■□□□□ 0.21
SREBF1-217ENST00000577897 GBF1Q92538 1859 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 FAM86C2PA6NEL3 165 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 GPR37L1O60883 481 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 ADAMTS4O75173 837 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 PGK2P07205 417 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 SEPT2Q15019 361 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
SREBF1-217ENST00000577897 MMP19Q99542 508 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 NRBP1Q9UHY1 535 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
SREBF1-217ENST00000577897 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
SREBF1-217ENST00000577897 GPAA1O43292 621 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 PDE6AP16499 860 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 MRE11P49959 708 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 TRDNQ13061 729 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 PPP2R2DQ66LE6 453 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
SREBF1-217ENST00000577897 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
SREBF1-217ENST00000577897 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
SREBF1-217ENST00000577897 TSEN34Q9BSV6 310 aaKnown RBP16.35■□□□□ 0.21
SREBF1-217ENST00000577897 MTIF3Q9H2K0 278 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms