RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF43-203ENST00000577716 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 CFBP00751 764 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 ABCB4P21439 1286 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 CRB1P82279 1406 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 FRMPD2Q68DX3 1309 aaPredicted RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 CTNNA1P35221 906 aaKnown RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 SIK1P57059 783 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 GTF2IP78347 998 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 MXRA7P84157 204 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 ZYXQ15942 572 aaKnown RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 RESP18Q5W5W9 173 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
RNF43-203ENST00000577716 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 CAPS2Q9BXY5 557 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 KDM3AQ9Y4C1 1321 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 SNAP23O00161 211 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 MTMR3Q13615 1198 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 TBC1D10CQ8IV04 446 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 KIFAP3Q92845 792 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 DHTKD1Q96HY7 919 aaPredicted RBP12.03□□□□□ -0.48
RNF43-203ENST00000577716 PANX2Q96RD6 677 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 AMFRQ9UKV5 643 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 TERF2Q15554 542 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 CCDC105Q8IYK2 499 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 P2RX5Q93086 422 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 EHHADHQ08426 723 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
RNF43-203ENST00000577716 FERMT1Q9BQL6 677 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
RNF43-203ENST00000577716 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
RNF43-203ENST00000577716 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.48
RNF43-203ENST00000577716 KRIT1O00522 736 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 PRPF3O43395 683 aaKnown RBP12.02□□□□□ -0.48
RNF43-203ENST00000577716 NDUFA10O95299 355 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 H2AFZP0C0S5 128 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 RASSF7Q02833 373 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 GUCY2DQ02846 1103 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 H2AFVQ71UI9 128 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.48
RNF43-203ENST00000577716 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
RNF43-203ENST00000577716 RETREG2Q8NC44 543 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 CUEDC2Q9H467 287 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 PANK4Q9NVE7 773 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.48
RNF43-203ENST00000577716 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 BCRP11274 1271 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 CASP1P29466 404 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 ATP5DP30049 168 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
RNF43-203ENST00000577716 SMTNP53814 917 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 CYP27A1Q02318 531 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 ADAM9Q13443 819 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
RNF43-203ENST00000577716 DPH6Q7L8W6 267 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 TPH2Q8IWU9 490 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.49
RNF43-203ENST00000577716 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 MAGEF1Q9HAY2 307 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 HARSP12081 509 aaKnown RBP12.02□□□□□ -0.49
RNF43-203ENST00000577716 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
RNF43-203ENST00000577716 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 WDR44Q5JSH3 913 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 RWDD2AQ9UIY3 292 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 NCAPD2Q15021 1401 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 GOLGA8KD6RF30 607 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 LIG3P49916 1009 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 KRT31Q15323 416 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 PRR16Q569H4 304 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 KCTD16Q68DU8 428 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 CYB5R4Q7L1T6 521 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 CROCCP2Q86T23 111 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 RAB17Q9H0T7 212 aa12.02□□□□□ -0.49
RNF43-203ENST00000577716 NCOA3Q9Y6Q9 1424 aa12.01□□□□□ -0.49
RNF43-203ENST00000577716 MFAP3LO75121 409 aa12.01□□□□□ -0.49
RNF43-203ENST00000577716 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
RNF43-203ENST00000577716 ALDH3A1P30838 453 aa12.01□□□□□ -0.49
RNF43-203ENST00000577716 CCT5P48643 541 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms