RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TREML2Q5T2D2 321 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 RASAL3Q86YV0 1011 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 RGS22Q8NE09 1264 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 MTMR8Q96EF0 704 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 BARHL2Q9NY43 387 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 HOXC10Q9NYD6 342 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 PNMA2Q9UL42 364 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 KCNJ14Q9UNX9 436 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 PCDHA1Q9Y5I3 950 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 STXBP3O00186 592 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 BRD1O95696 1058 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 PKP1Q13835 747 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 PPP1R18Q6NYC8 613 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 FAM177A1Q8N128 213 aaPredicted RBP18.98■□□□□ 0.63
ERCC4-208ENST00000576348 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 RANBP17Q9H2T7 1088 aaKnown RBP18.98■□□□□ 0.63
ERCC4-208ENST00000576348 C6orf50Q9HD87 102 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 GJB4Q9NTQ9 266 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 PNMA3Q9UL41 463 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 ATP6V1DQ9Y5K8 247 aa18.98■□□□□ 0.63
ERCC4-208ENST00000576348 DSG3P32926 999 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 USH1GQ495M9 461 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 COA7Q96BR5 231 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 ATG4CQ96DT6 458 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 MYPNQ86TC9 1320 aa18.97■□□□□ 0.63
ERCC4-208ENST00000576348 MANSC4A6NHS7 340 aaPredicted RBP18.96■□□□□ 0.63
ERCC4-208ENST00000576348 F13A1P00488 732 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 MMP1P03956 469 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 GNA11P29992 359 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 HOXA7P31268 230 aaPredicted RBP18.96■□□□□ 0.63
ERCC4-208ENST00000576348 KRT2P35908 639 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 ADCY7P51828 1080 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 GRM1Q13255 1194 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 GALNT17Q6IS24 598 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 BICD2Q8TD16 824 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 CCPG1Q9ULG6 757 aa18.96■□□□□ 0.63
ERCC4-208ENST00000576348 SMCO2A6NFE2 343 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 VWA5AO00534 786 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 SLC10A3P09131 477 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 DIS3L2Q8IYB7 885 aaKnown RBP18.95■□□□□ 0.62
ERCC4-208ENST00000576348 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 HHIPL1Q96JK4 782 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 PHF20Q9BVI0 1012 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 GLT8D2Q9H1C3 349 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
ERCC4-208ENST00000576348 ZSCAN16Q9H4T2 348 aaPredicted RBP18.95■□□□□ 0.62
ERCC4-208ENST00000576348 SLC38A10Q9HBR0 1119 aa18.95■□□□□ 0.62
ERCC4-208ENST00000576348 PPP1R11O60927 126 aaPredicted RBP18.94■□□□□ 0.62
ERCC4-208ENST00000576348 ICAM1P05362 532 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 APLP1P51693 650 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 MRPL12P52815 198 aaKnown RBP18.94■□□□□ 0.62
ERCC4-208ENST00000576348 PLS1Q14651 629 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 ANKRD23Q86SG2 305 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 BRI3BPQ8WY22 251 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 CUL5Q93034 780 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 MS4A4AQ96JQ5 239 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 RAVER2Q9HCJ3 691 aaKnown RBP18.94■□□□□ 0.62
ERCC4-208ENST00000576348 MRPL11Q9Y3B7 192 aaKnown RBP18.94■□□□□ 0.62
ERCC4-208ENST00000576348 ABCB11O95342 1321 aa18.94■□□□□ 0.62
ERCC4-208ENST00000576348 ESYT2A0FGR8 921 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 SPDYE16A6NNV3 312 aaPredicted RBP18.93■□□□□ 0.62
ERCC4-208ENST00000576348 PDHXO00330 501 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 OAZ1P54368 228 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 KIF23Q02241 960 aaPredicted RBP18.93■□□□□ 0.62
ERCC4-208ENST00000576348 MOGSQ13724 837 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 GPAT2Q6NUI2 795 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 BLIDQ8IZY5 108 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 SMCR8Q8TEV9 937 aaPredicted RBP18.93■□□□□ 0.62
ERCC4-208ENST00000576348 GTF3C2Q8WUA4 911 aaPredicted RBP18.93■□□□□ 0.62
ERCC4-208ENST00000576348 P2RX7Q99572 595 aaKnown RBP18.93■□□□□ 0.62
ERCC4-208ENST00000576348 PSTPIP2Q9H939 334 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 CREBZFQ9NS37 354 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 PCDHA4Q9UN74 947 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 SLC45A1Q9Y2W3 748 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 ZDHHC9Q9Y397 364 aa18.93■□□□□ 0.62
ERCC4-208ENST00000576348 BTBD19C9JJ37 291 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 ALAS1P13196 640 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 HERVK_113P62684 666 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 SREBF2Q12772 1141 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
ERCC4-208ENST00000576348 TYW1BQ6NUM6 668 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
ERCC4-208ENST00000576348 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 AGBL1Q96MI9 1066 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
ERCC4-208ENST00000576348 PAGR1Q9BTK6 254 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 FOXP1Q9H334 677 aaPredicted RBP18.92■□□□□ 0.62
ERCC4-208ENST00000576348 TRPM7Q96QT4 1865 aa18.92■□□□□ 0.62
ERCC4-208ENST00000576348 PHIPQ8WWQ0 1821 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 BTBD18B2RXH4 712 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
ERCC4-208ENST00000576348 INHBEP58166 350 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 RESTQ13127 1097 aa18.91■□□□□ 0.62
ERCC4-208ENST00000576348 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
ERCC4-208ENST00000576348 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
ERCC4-208ENST00000576348 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
ERCC4-208ENST00000576348 GBP4Q96PP9 640 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms