RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 ATP2A1O14983 1001 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 ADORA2AP29274 412 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 FGD1P98174 961 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 DHX32Q7L7V1 743 aaKnown RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 TMTC2Q8N394 836 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 ZNF333Q96JL9 665 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 AGBL1Q96MI9 1066 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 APBA2Q99767 749 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 RANBP17Q9H2T7 1088 aaKnown RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 CPVLQ9H3G5 476 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 LY9Q9HBG7 655 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 SLC5A4Q9NY91 659 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 CCPG1Q9ULG6 757 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 COLQQ9Y215 455 aaPredicted RBP20.15■□□□□ 0.82
CLDN7-207ENST00000574070 RIPK3Q9Y572 518 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
CLDN7-207ENST00000574070 INHAP05111 366 aa20.14■□□□□ 0.81
CLDN7-207ENST00000574070 HMGB1P09429 215 aaKnown RBP20.14■□□□□ 0.81
CLDN7-207ENST00000574070 ALAS1P13196 640 aa20.14■□□□□ 0.81
CLDN7-207ENST00000574070 TCEANC2Q96MN5 208 aa20.14■□□□□ 0.81
CLDN7-207ENST00000574070 VAT1LQ9HCJ6 419 aa20.14■□□□□ 0.81
CLDN7-207ENST00000574070 PSMA5P28066 241 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
CLDN7-207ENST00000574070 BLOC1S2Q6QNY1 142 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 TRMT44Q8IYL2 757 aaKnown RBP20.13■□□□□ 0.81
CLDN7-207ENST00000574070 ZNF654Q8IZM8 581 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 STAG2Q8N3U4 1231 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 CHST13Q8NET6 341 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 USP6NLQ92738 828 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 KCNB2Q92953 911 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 DDX11Q96FC9 970 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 FBXO40Q9UH90 709 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 PLXNB2O15031 1838 aa20.13■□□□□ 0.81
CLDN7-207ENST00000574070 ZNF536O15090 1300 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 HMGCRP04035 888 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 ICAM1P05362 532 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 XRCC5P13010 732 aaKnown RBP20.12■□□□□ 0.81
CLDN7-207ENST00000574070 LIFRP42702 1097 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 GRM4Q14833 912 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 CCL14Q16627 93 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 TKFCQ3LXA3 575 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 ABRAQ8N0Z2 381 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
CLDN7-207ENST00000574070 TRIB2Q92519 343 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 ACAD9Q9H845 621 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 RNF146Q9NTX7 359 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 MAD2L2Q9UI95 211 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 GTF3C3Q9Y5Q9 886 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
CLDN7-207ENST00000574070 WDR19Q8NEZ3 1342 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 KLRF2D3W0D1 207 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 DDAH1O94760 285 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 CPA1P15085 419 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 TROAPQ12815 778 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 MTFR1Q15390 333 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 CDC37Q16543 378 aaPredicted RBP20.11■□□□□ 0.81
CLDN7-207ENST00000574070 ADGRF4Q8IZF3 695 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 NPLOC4Q8TAT6 608 aa20.11■□□□□ 0.81
CLDN7-207ENST00000574070 PALM3A6NDB9 673 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-207ENST00000574070 COBLO75128 1261 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 PGK2P07205 417 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 TAL1P17542 331 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-207ENST00000574070 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
CLDN7-207ENST00000574070 KIF5BP33176 963 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 EXOSC10Q01780 885 aaKnown RBP20.1■□□□□ 0.81
CLDN7-207ENST00000574070 MFSD14CQ5VZR4 134 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 RAB11FIP4Q86YS3 637 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 PNMA2Q9UL42 364 aa20.1■□□□□ 0.81
CLDN7-207ENST00000574070 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
CLDN7-207ENST00000574070 HOXC6P09630 235 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 CALM1P0DP23 149 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 CALM2P0DP24 149 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 CALM3P0DP25 149 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 CCL5P13501 91 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 RXRAP19793 462 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 TRIM32Q13049 653 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 USH1GQ495M9 461 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 CCDC144CPQ8IYA2 1237 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 RNF208Q9H0X6 261 aa20.09■□□□□ 0.81
CLDN7-207ENST00000574070 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 Q6ZUG5 572 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 HOMER1Q86YM7 354 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 UNC93B1Q9H1C4 597 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 JMJD4Q9H9V9 463 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 FLRT1Q9NZU1 646 aa20.08■□□□□ 0.81
CLDN7-207ENST00000574070 H0YGN5 161 aa20.07■□□□□ 0.8
CLDN7-207ENST00000574070 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
CLDN7-207ENST00000574070 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
CLDN7-207ENST00000574070 MUM1L1Q5H9M0 696 aa20.07■□□□□ 0.8
CLDN7-207ENST00000574070 NSMFQ6X4W1 530 aa20.07■□□□□ 0.8
CLDN7-207ENST00000574070 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms