RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 ADCY3O60266 1144 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
NDE1-208ENST00000573694 AKR1B1P15121 316 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 FLT3LGP49771 235 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 HMGCS2P54868 508 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 FUT2Q10981 343 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 KLHL40Q2TBA0 621 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
NDE1-208ENST00000573694 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 LPAR1Q92633 364 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 SYNPO2Q9UMS6 1093 aa11.08□□□□□ -0.64
NDE1-208ENST00000573694 STRNO43815 780 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 SGPL1O95470 568 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 SHMT1P34896 483 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 KRT85P78386 507 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 CAP1Q01518 475 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
NDE1-208ENST00000573694 SKOR2Q2VWA4 1001 aaPredicted RBP11.07□□□□□ -0.64
NDE1-208ENST00000573694 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 KRT40Q6A162 431 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 ANKRD13CQ8N6S4 541 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 NEDD1Q8NHV4 660 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 SHISA4Q96DD7 197 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
NDE1-208ENST00000573694 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
NDE1-208ENST00000573694 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
NDE1-208ENST00000573694 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 RBM28Q9NW13 759 aaKnown RBP11.07□□□□□ -0.64
NDE1-208ENST00000573694 TFIP11Q9UBB9 837 aaKnown RBP11.07□□□□□ -0.64
NDE1-208ENST00000573694 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
NDE1-208ENST00000573694 LOC285556D6RIA3 1793 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CCDC196A0A1B0GTZ2 297 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 HMGCRP04035 888 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CALM1P0DP23 149 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CALM2P0DP24 149 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CALM3P0DP25 149 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CCL5P13501 91 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 NT5C2P49902 561 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 HERVK_113P62684 666 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 PRKCZQ05513 592 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 MTMR2Q13614 643 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 GSE1Q14687 1217 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 GRM4Q14833 912 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CAVIN1Q6NZI2 390 aaKnown RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 SRBD1Q8N5C6 995 aaKnown RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 CTCFLQ8NI51 663 aaPredicted RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 TMEM47Q9BQJ4 181 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 RNF208Q9H0X6 261 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 ZSCAN16Q9H4T2 348 aaPredicted RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 BIN2Q9UBW5 565 aaPredicted RBP11.06□□□□□ -0.64
NDE1-208ENST00000573694 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 RPTORQ8N122 1335 aa11.06□□□□□ -0.64
NDE1-208ENST00000573694 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 GH2P01242 217 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 CTGFP29279 349 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
NDE1-208ENST00000573694 PKN1Q16512 942 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 CCDC178Q5BJE1 867 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
NDE1-208ENST00000573694 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
NDE1-208ENST00000573694 LEO1Q8WVC0 666 aaPredicted RBP11.05□□□□□ -0.64
NDE1-208ENST00000573694 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
NDE1-208ENST00000573694 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
NDE1-208ENST00000573694 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms