RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CNBD1Q8NA66 436 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 TNKSO95271 1327 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 SMCO2A6NFE2 343 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 GBP7Q8N8V2 638 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 HELBQ8NG08 1087 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 CACTINQ8WUQ7 758 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 TACO1Q9BSH4 297 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 DAAM1Q9Y4D1 1078 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 KRIT1O00522 736 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 STX2P32856 288 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 TFAP4Q01664 338 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 LRMPQ12912 555 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 PICALMQ13492 652 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 FAM26FQ5R3K3 315 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 C17orf53Q8N3J3 647 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 Q9H521 79 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCDC188H7C350 402 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 SART1O43290 800 aaKnown RBP13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 SUN1O94901 812 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 SLC1A4P43007 532 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 BIRC3Q13489 604 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 PDE8BO95263 885 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 ALCAMQ13740 583 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 ASPRV1Q53RT3 343 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 CUL1Q13616 776 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
PCDHGA9-201ENST00000573521 PRPF3O43395 683 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 CYP21A2P08686 494 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 KRT5P13647 590 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 IBSPP21815 317 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 FKBP3Q00688 224 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 MMP1P03956 469 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 PPP1R21Q6ZMI0 780 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 KLHL7Q8IXQ5 586 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 P2RX5Q93086 422 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 CASQ2O14958 399 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCNE1P24864 410 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 POLR2BP30876 1174 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 PCDHA12Q9UN75 941 aa13.6□□□□□ -0.23
PCDHGA9-201ENST00000573521 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PKP1Q13835 747 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 HADHQ16836 314 aaKnown RBP13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PPP1R12CQ9BZL4 782 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 EDEM3Q9BZQ6 932 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 GLI2P10070 1586 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 RPS8P62241 208 aaKnown RBP13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 MYCT1Q8N699 235 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PCDHA4Q9UN74 947 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PARP3Q9Y6F1 533 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 PNPLA6Q8IY17 1366 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 KRT15P19012 456 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 NBPF9Q3BBW0 867 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
PCDHGA9-201ENST00000573521 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 BACH1O14867 736 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 GCNT3O95395 438 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 ADD1P35611 737 aaKnown RBP13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 KIF11P52732 1056 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 SNCBQ16143 134 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 DCUN1D2Q6PH85 259 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 PI4K2BQ8TCG2 481 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 MRPL11Q9Y3B7 192 aaKnown RBP13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 CAPN7Q9Y6W3 813 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 ADD2P35612 726 aa13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-201ENST00000573521 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms