RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 MCCP23508 829 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 FAM227BQ96M60 508 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 ABHD16BQ9H3Z7 469 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 INCENPQ9NQS7 918 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 HOMER2Q9NSB8 354 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 LAMA4Q16363 1823 aa22.89■■□□□ 1.25
HCFC1R1-204ENST00000573095 LCTP09848 1927 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 RANBP6O60518 1105 aaKnown RBP22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 DUSP11O75319 330 aaKnown RBP22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 TLE2Q04725 743 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 IKQ13123 557 aaPredicted RBP22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 ACVR2BQ13705 512 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 TKFCQ3LXA3 575 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 MCMDC2Q4G0Z9 681 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 RCSD1Q6JBY9 416 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 Q7L0L9 218 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 ARMCX2Q7L311 632 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 RASGRP2Q7LDG7 609 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 FAM133AQ8N9E0 248 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 KLHDC9Q8NEP7 349 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 RNF146Q9NTX7 359 aa22.88■■□□□ 1.25
HCFC1R1-204ENST00000573095 TRIM43BA6NCK2 446 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 MOXD2PA6NHM9 499 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 CLTBP09497 229 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 CST5P28325 142 aaPredicted RBP22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 KCTD1Q719H9 257 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 SH3RF1Q7Z6J0 888 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 SMC5Q8IY18 1101 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 TRIM43Q96BQ3 446 aaPredicted RBP22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 LNPKQ9C0E8 428 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 A1CFQ9NQ94 594 aaKnown RBP22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 MTMR10Q9NXD2 777 aa22.87■■□□□ 1.25
HCFC1R1-204ENST00000573095 ADCY6O43306 1168 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 FGAP02671 866 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 ACLYP53396 1101 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCSAPQ6IQ19 270 aaPredicted RBP22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 NUP133Q8WUM0 1156 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 BADQ92934 168 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 AGBL1Q96MI9 1066 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 KATNBL1Q9H079 304 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 STARD7Q9NQZ5 370 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 PRR12Q9ULL5 1215 aa22.86■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCDC171Q6TFL3 1326 aa22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 POTEB2H3BUK9 544 aa22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 HSPD1P10809 573 aaKnown RBP22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 NMIQ13287 307 aaPredicted RBP22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCDC144BQ3MJ40 725 aa22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 ZNF589Q86UQ0 364 aaPredicted RBP22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCDC144CPQ8IYA2 1237 aa22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 DCAF4Q8WV16 495 aa22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 UPF3AQ9H1J1 476 aaKnown RBP22.85■■□□□ 1.25
HCFC1R1-204ENST00000573095 COL6A3P12111 3177 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 MYADML2A6NDP7 307 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 KIAA0355O15063 1070 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 PQBP1O60828 265 aaKnown RBP22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 CNTN2Q02246 1040 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 FAM109BQ6ICB4 259 aaPredicted RBP22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 ANKRD33Q7Z3H0 272 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 CHMP4CQ96CF2 233 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 TOX2Q96NM4 488 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 TRERF1Q96PN7 1200 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 TCP11L1Q9NUJ3 509 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 STXBP5LQ9Y2K9 1186 aa22.84■■□□□ 1.25
HCFC1R1-204ENST00000573095 TRIM6-TRIM34B2RNG4 842 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 ALAS1P13196 640 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 GJA9P57773 515 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 SHHQ15465 462 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 KCNA10Q16322 511 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCDC96Q2M329 555 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 CCDC174Q6PII3 467 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 PCSK9Q8NBP7 692 aaKnown RBP22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 RWDD1Q9H446 243 aaPredicted RBP22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 SPC25Q9HBM1 224 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 TOMM22Q9NS69 142 aa22.83■■□□□ 1.25
HCFC1R1-204ENST00000573095 C6orf222P0C671 652 aaPredicted RBP22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 TOP1P11387 765 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 PCP11498 1178 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 NKX3-2P78367 333 aa22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 RRP12Q5JTH9 1297 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 C9orf50Q5SZB4 431 aa22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 BTNL9Q6UXG8 535 aa22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 RANBP17Q9H2T7 1088 aaKnown RBP22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 ELP1O95163 1332 aa22.82■■□□□ 1.24
HCFC1R1-204ENST00000573095 SOWAHBA6NEL2 793 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 ASB14A6NK59 587 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 ICAM1P05362 532 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 ITGB8P26012 769 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 RILPL2Q969X0 211 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 GLT1D1Q96MS3 346 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 TMEM47Q9BQJ4 181 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 OSBPL3Q9H4L5 887 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 CYP39A1Q9NYL5 469 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 CCPG1Q9ULG6 757 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 MTMR7Q9Y216 660 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 ASTN1O14525 1302 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 MROH7Q68CQ1 1323 aa22.81■■□□□ 1.24
HCFC1R1-204ENST00000573095 ASGR1P07306 291 aa22.8■■□□□ 1.24
HCFC1R1-204ENST00000573095 MFAP1P55081 439 aaKnown RBP22.8■■□□□ 1.24
HCFC1R1-204ENST00000573095 SNAP25P60880 206 aa22.8■■□□□ 1.24
HCFC1R1-204ENST00000573095 IRX5P78411 483 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms