RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SHCBP1Q8NEM2 672 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 TMEM87BQ96K49 555 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 GJD2Q9UKL4 321 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 PLXNA1Q9UIW2 1896 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 ELNP15502 786 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 GRB14Q14449 540 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 C8orf34Q49A92 452 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 MORN1Q5T089 497 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 NFXL1Q6ZNB6 911 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 ZNF654Q8IZM8 581 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 STAG2Q8N3U4 1231 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 DPF3Q92784 378 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 MTA3Q9BTC8 594 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 RANBP17Q9H2T7 1088 aaKnown RBP18.46■□□□□ 0.55
CHD3-215ENST00000572750 HOMER2Q9NSB8 354 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 RIPK3Q9Y572 518 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 ZNF536O15090 1300 aa18.46■□□□□ 0.55
CHD3-215ENST00000572750 ATP2A1O14983 1001 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 SEC24BO95487 1268 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 SLC25A27O95847 323 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 PTPREP23469 700 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 OAZ1P54368 228 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 TROAPQ12815 778 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 GRM4Q14833 912 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 DHX32Q7L7V1 743 aaKnown RBP18.45■□□□□ 0.54
CHD3-215ENST00000572750 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 NBPF11Q86T75 865 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 RAB11FIP4Q86YS3 637 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 NUDT12Q9BQG2 462 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 COL25A1Q9BXS0 654 aaPredicted RBP18.45■□□□□ 0.54
CHD3-215ENST00000572750 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 MROH8Q9H579 483 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 MAD2L2Q9UI95 211 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 SMCHD1A6NHR9 2005 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
CHD3-215ENST00000572750 ZNFX1Q9P2E3 1918 aaKnown RBP18.45■□□□□ 0.54
CHD3-215ENST00000572750 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 ADCY3O60266 1144 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 FDX1P10109 184 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 RXRAP19793 462 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 CASTP20810 708 aaKnown RBP18.44■□□□□ 0.54
CHD3-215ENST00000572750 CYP2B6P20813 491 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 ADORA2AP29274 412 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 EXOSC10Q01780 885 aaKnown RBP18.44■□□□□ 0.54
CHD3-215ENST00000572750 IRF5Q13568 498 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 MTFR1Q15390 333 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 NUP133Q8WUM0 1156 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 USP6NLQ92738 828 aa18.44■□□□□ 0.54
CHD3-215ENST00000572750 SLC15A5A6NIM6 579 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
CHD3-215ENST00000572750 DDAH1O94760 285 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 HMGB1P09429 215 aaKnown RBP18.43■□□□□ 0.54
CHD3-215ENST00000572750 GRK4P32298 578 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 COPB2P35606 906 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 RGS2P41220 211 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 LIFRP42702 1097 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 MAP2K5Q13163 448 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 BLOC1S2Q6QNY1 142 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 SLAIN1Q8ND83 568 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 MMP19Q99542 508 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 APBA2Q99767 749 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
CHD3-215ENST00000572750 MUC3AQ02505 3323 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 PALM3A6NDB9 673 aaPredicted RBP18.42■□□□□ 0.54
CHD3-215ENST00000572750 KLRF2D3W0D1 207 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 ICAM1P05362 532 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 FCER1AP12319 257 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 ALAS1P13196 640 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
CHD3-215ENST00000572750 CCL14Q16627 93 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 MICU3Q86XE3 530 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 CCDC144CPQ8IYA2 1237 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 ADGRF4Q8IZF3 695 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 TRIB2Q92519 343 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 LCTP09848 1927 aa18.42■□□□□ 0.54
CHD3-215ENST00000572750 PRUNE2Q8WUY3 3088 aa18.41■□□□□ 0.54
CHD3-215ENST00000572750 KCTD2Q14681 263 aa18.41■□□□□ 0.54
CHD3-215ENST00000572750 SLC35G1Q2M3R5 365 aa18.41■□□□□ 0.54
CHD3-215ENST00000572750 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
CHD3-215ENST00000572750 UPF3BQ9BZI7 483 aaKnown RBP18.41■□□□□ 0.54
CHD3-215ENST00000572750 BAZ2BQ9UIF8 2168 aaKnown RBP18.4■□□□□ 0.54
CHD3-215ENST00000572750 STRNO43815 780 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 COBLO75128 1261 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 INHAP05111 366 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 PGK2P07205 417 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 PSMA5P28066 241 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 FGD1P98174 961 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 TRIM32Q13049 653 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 APOA5Q6Q788 366 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 Q6ZUG5 572 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 ABRAQ8N0Z2 381 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
CHD3-215ENST00000572750 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms