RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 GJC2Q5T442 439 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 CENPQQ7L2Z9 268 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 TRERF1Q96PN7 1200 aa20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 ZSCAN10Q96SZ4 725 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 KRT23Q9C075 422 aa20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 CCPG1Q9ULG6 757 aa20.89■□□□□ 0.93
CTDNEP1-207ENST00000572043 DNAJC25-GNG10A0A024R161 153 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 SGSM2O43147 1006 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 ZNF543Q08ER8 600 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 DGKHQ86XP1 1220 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 SENP6Q9GZR1 1112 aaPredicted RBP20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 KAT14Q9H8E8 782 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 COLQQ9Y215 455 aaPredicted RBP20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
CTDNEP1-207ENST00000572043 TNKSO95271 1327 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 CNTN2Q02246 1040 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 MUM1L1Q5H9M0 696 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 CHRDL2Q6WN34 429 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 LENG1Q96BZ8 264 aaPredicted RBP20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 UBAC1Q9BSL1 405 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 RANBP17Q9H2T7 1088 aaKnown RBP20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 CNNM2Q9H8M5 875 aa20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 ZHX1Q9UKY1 873 aaPredicted RBP20.87■□□□□ 0.93
CTDNEP1-207ENST00000572043 POTEB2H3BUK9 544 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 CYP21A2P08686 494 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 COL6A1P12109 1028 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 TKFCQ3LXA3 575 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 CCDC178Q5BJE1 867 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 BTNL9Q6UXG8 535 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 ENAHQ8N8S7 591 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 PNMA1Q8ND90 353 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 FGD4Q96M96 766 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 UBA5Q9GZZ9 404 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 A1CFQ9NQ94 594 aaKnown RBP20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 PCDH10Q9P2E7 1040 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 ZMYND8Q9ULU4 1186 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 TAF6LQ9Y6J9 622 aa20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-207ENST00000572043 DNM1LO00429 736 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 SNAI1O95863 264 aaPredicted RBP20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 ICAM1P05362 532 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 ZNF865P0CJ78 1059 aaPredicted RBP20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 SNHG28P0DPA3 235 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 NSMFQ6X4W1 530 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
CTDNEP1-207ENST00000572043 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 RARBP10826 455 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 SYN1P17600 705 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 NT5C2P49902 561 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 TRDNQ13061 729 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 LRRC26Q2I0M4 334 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 HABP4Q5JVS0 413 aaKnown RBP20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.84■□□□□ 0.931e-10■■■□□ 14.6
CTDNEP1-207ENST00000572043 ARRDC4Q8NCT1 418 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 XPNPEP3Q9NQH7 507 aa20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.84■□□□□ 0.93
CTDNEP1-207ENST00000572043 KBTBD13C9JR72 458 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 PGK1P00558 417 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 AKR1A1P14550 325 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 IFIT1BQ5T764 474 aaKnown RBP20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 MAMDC4Q6UXC1 1216 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 ARMCX2Q7L311 632 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 CCDC144CPQ8IYA2 1237 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 ANKS1AQ92625 1134 aa20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 PURBQ96QR8 312 aaKnown RBP20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 DDX49Q9Y6V7 483 aaKnown RBP20.83■□□□□ 0.93
CTDNEP1-207ENST00000572043 PDE4DIPQ5VU43 2346 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 SOWAHBA6NEL2 793 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 ACVR2BQ13705 512 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 LRRC41Q15345 812 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 GPATCH4Q5T3I0 446 aaKnown RBP20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 KIAA1211Q6ZU35 1233 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 CHST3Q7LGC8 479 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 ZNF467Q7Z7K2 595 aaPredicted RBP20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 RALYLQ86SE5 291 aaKnown RBP20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 FAM133AQ8N9E0 248 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 RBM8AQ9Y5S9 174 aaKnown RBP20.82■□□□□ 0.92
CTDNEP1-207ENST00000572043 LAMA4Q16363 1823 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 E7EWF7 191 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 NFIBO00712 420 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 USH1GQ495M9 461 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 STOX1Q6ZVD7 989 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 MAP4K1Q92918 833 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
CTDNEP1-207ENST00000572043 PTPDC1A2A3K4 754 aa20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 DHX16O60231 1041 aaKnown RBP20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 PARP1P09874 1014 aaKnown RBP20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 ESYT1Q9BSJ8 1104 aa20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 VAT1LQ9HCJ6 419 aa20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 RBM27Q9P2N5 1060 aaKnown RBP20.8■□□□□ 0.92
CTDNEP1-207ENST00000572043 IFIT3O14879 490 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms