RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLC27A2O14975 620 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 CYBAP13498 195 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 OAZ1P54368 228 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 ANTXR2P58335 489 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 OLFML2BQ68BL8 750 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 FGD4Q96M96 766 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 RANBP17Q9H2T7 1088 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
GTF3C1-213ENST00000571886 FDX1P10109 184 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 ALAS1P13196 640 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 COPB2P35606 906 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 KCTD2Q14681 263 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 ANO1Q5XXA6 986 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 KIAA1211Q6ZU35 1233 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 MB21D2Q8IYB1 491 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 TRERF1Q96PN7 1200 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 ANO2Q9NQ90 1003 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 OGDHLQ9ULD0 1010 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 PDE4DIPQ5VU43 2346 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 LCTP09848 1927 aa12.01□□□□□ -0.49
GTF3C1-213ENST00000571886 ALPK3Q96L96 1907 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 CDC45O75419 566 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 FARP2O94887 1054 aaPredicted RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 CENPBP07199 599 aaPredicted RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 CNGA1P29973 690 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 NT5C2P49902 561 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 CNTN2Q02246 1040 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 TRDNQ13061 729 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 IFIT1BQ5T764 474 aaKnown RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 CHST13Q8NET6 341 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 NCOA7Q8NI08 942 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 DDX11Q96FC9 970 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 PAWRQ96IZ0 340 aaKnown RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 A1CFQ9NQ94 594 aaKnown RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 RNF146Q9NTX7 359 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
GTF3C1-213ENST00000571886 DIS3Q9Y2L1 958 aaKnown RBP12□□□□□ -0.49
GTF3C1-213ENST00000571886 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 ICAM1P05362 532 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 ANKRD35Q8N283 1001 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 TINF2Q9BSI4 451 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 ACAD9Q9H845 621 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 SLC5A4Q9NY91 659 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 DDX20Q9UHI6 824 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 ASTN1O14525 1302 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 MYH6P13533 1939 aa11.99□□□□□ -0.49
GTF3C1-213ENST00000571886 NFIBO00712 420 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 ZNF865P0CJ78 1059 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 CAPN2P17655 700 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 ADGRF4Q8IZF3 695 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 VAT1LQ9HCJ6 419 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 FBXO40Q9UH90 709 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 MAD2L2Q9UI95 211 aa11.98□□□□□ -0.49
GTF3C1-213ENST00000571886 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 WTAPQ15007 396 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 ADCK5Q3MIX3 580 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 ASPRV1Q53RT3 343 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 TMEM67Q5HYA8 995 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 LRRC2Q9BYS8 371 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 JMJD4Q9H9V9 463 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 LY9Q9HBG7 655 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 CYP39A1Q9NYL5 469 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
GTF3C1-213ENST00000571886 PFASO15067 1338 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 SEPT4O43236 478 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 ADCY6O43306 1168 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 PRC1O43663 620 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 TROAPQ12815 778 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 BAATQ14032 418 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 GRM4Q14833 912 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms