RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
SMG6-206ENST00000570668 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
SMG6-206ENST00000570668 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
SMG6-206ENST00000570668 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 TFRCP02786 760 aaKnown RBP13.06□□□□□ -0.32
SMG6-206ENST00000570668 PGK2P07205 417 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
SMG6-206ENST00000570668 SLC16A2P36021 539 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 IFIT1BQ5T764 474 aaKnown RBP13.06□□□□□ -0.32
SMG6-206ENST00000570668 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 RALYLQ86SE5 291 aaKnown RBP13.06□□□□□ -0.32
SMG6-206ENST00000570668 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
SMG6-206ENST00000570668 ICAM1P05362 532 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 CYBAP13498 195 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 SNAP25P60880 206 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 LHX8Q68G74 356 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 ANKLE1Q8NAG6 615 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 ACAD9Q9H845 621 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
SMG6-206ENST00000570668 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 SLC27A2O14975 620 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 FARP2O94887 1054 aaPredicted RBP13.04□□□□□ -0.32
SMG6-206ENST00000570668 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
SMG6-206ENST00000570668 MB21D2Q8IYB1 491 aaPredicted RBP13.04□□□□□ -0.32
SMG6-206ENST00000570668 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
SMG6-206ENST00000570668 TRPV1Q8NER1 839 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 TINF2Q9BSI4 451 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 HOMER2Q9NSB8 354 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 NRBP1Q9UHY1 535 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
SMG6-206ENST00000570668 ERICH2A1L162 156 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
SMG6-206ENST00000570668 MSCO60682 206 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 ALAS1P13196 640 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
SMG6-206ENST00000570668 ANTXR2P58335 489 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
SMG6-206ENST00000570668 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
SMG6-206ENST00000570668 DDX20Q9UHI6 824 aaKnown RBP13.03□□□□□ -0.32
SMG6-206ENST00000570668 CCPG1Q9ULG6 757 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
SMG6-206ENST00000570668 SEPT4O43236 478 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
SMG6-206ENST00000570668 CNGA1P29973 690 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
SMG6-206ENST00000570668 WTAPQ15007 396 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 MUM1L1Q5H9M0 696 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 CHST3Q7LGC8 479 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 FAM133AQ8N9E0 248 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 IGDCC4Q8TDY8 1250 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
SMG6-206ENST00000570668 FGD4Q96M96 766 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 PFASO15067 1338 aa13.02□□□□□ -0.33
SMG6-206ENST00000570668 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 TROAPQ12815 778 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 NECAB2Q7Z6G3 386 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 CYP39A1Q9NYL5 469 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 SYNGAP1Q96PV0 1343 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 CEP290O15078 2479 aa13.01□□□□□ -0.33
SMG6-206ENST00000570668 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
SMG6-206ENST00000570668 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
SMG6-206ENST00000570668 ZNF865P0CJ78 1059 aaPredicted RBP13□□□□□ -0.33
SMG6-206ENST00000570668 TAL1P17542 331 aaPredicted RBP13□□□□□ -0.33
SMG6-206ENST00000570668 MCM5P33992 734 aa13□□□□□ -0.33
SMG6-206ENST00000570668 CNTN2Q02246 1040 aa13□□□□□ -0.33
SMG6-206ENST00000570668 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
SMG6-206ENST00000570668 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
SMG6-206ENST00000570668 PRPF38BQ5VTL8 546 aaKnown RBP13□□□□□ -0.33
SMG6-206ENST00000570668 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
SMG6-206ENST00000570668 STAG2Q8N3U4 1231 aa13□□□□□ -0.33
SMG6-206ENST00000570668 DIS3LQ8TF46 1054 aaKnown RBP13□□□□□ -0.33
SMG6-206ENST00000570668 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
SMG6-206ENST00000570668 TMEM87BQ96K49 555 aa13□□□□□ -0.33
SMG6-206ENST00000570668 HTATIP2Q9BUP3 242 aa13□□□□□ -0.33
SMG6-206ENST00000570668 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms