RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ANKRD33Q7Z3H0 272 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 PRPF38AQ8NAV1 312 aaKnown RBP14.42□□□□□ -0.1
CAPN3-220ENST00000569827 TSEN34Q9BSV6 310 aaKnown RBP14.42□□□□□ -0.1
CAPN3-220ENST00000569827 ECHDC1Q9NTX5 307 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 MYH6P13533 1939 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
CAPN3-220ENST00000569827 TIMP1P01033 207 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 CSF2RAP15509 400 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 MAMDC4Q6UXC1 1216 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 APPBP2Q92624 585 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 TIFAQ96CG3 184 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 GLT1D1Q96MS3 346 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 SLC38A10Q9HBR0 1119 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
CAPN3-220ENST00000569827 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 CTAGE5O15320 804 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 RNF113AO15541 343 aaKnown RBP14.4□□□□□ -0.1
CAPN3-220ENST00000569827 CYP2C18P33260 490 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 TMEM240Q5SV17 173 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 TMEM63BQ5T3F8 832 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 DIEXFQ68CQ4 756 aaKnown RBP14.4□□□□□ -0.1
CAPN3-220ENST00000569827 CCDC129Q6ZRS4 1044 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 ZNF444Q8N0Y2 327 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-220ENST00000569827 TET1Q8NFU7 2136 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-220ENST00000569827 TOX2Q96NM4 488 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 ZNF576Q9H609 170 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 MTMR4Q9NYA4 1195 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 PTPRSQ13332 1948 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 ASTN1O14525 1302 aa14.4□□□□□ -0.1
CAPN3-220ENST00000569827 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 TMEM232C9JQI7 657 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 CDK7P50613 346 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 GNASQ5JWF2 1037 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 SLFN13Q68D06 897 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 NOL8Q76FK4 1167 aaKnown RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 EEPD1Q7L9B9 569 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 AGBL1Q96MI9 1066 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 PURBQ96QR8 312 aaKnown RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 PBX4Q9BYU1 374 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 PRDM12Q9H4Q4 367 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 INCENPQ9NQS7 918 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
CAPN3-220ENST00000569827 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
CAPN3-220ENST00000569827 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ARVCFO00192 962 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ATP2A1O14983 1001 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 NMT2O60551 498 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 TTLL1O95922 423 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 BMP3P12645 472 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 CST5P28325 142 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 GJA9P57773 515 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ZNF365Q70YC5 407 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 KCTD1Q719H9 257 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 UPF3AQ9H1J1 476 aaKnown RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ABHD16BQ9H3Z7 469 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 CXXC1Q9P0U4 656 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-220ENST00000569827 ZNF536O15090 1300 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 TANC1Q9C0D5 1861 aa14.38□□□□□ -0.11
CAPN3-220ENST00000569827 PLIN4Q96Q06 1357 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 XIRP2A4UGR9 3374 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 TMEM265A0A087WTH1 108 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 RBAK-RBAKDNI3L0D1 243 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 ALAS1P13196 640 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 PSMC6P62333 389 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 TFAP4Q01664 338 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 PPIGQ13427 754 aaKnown RBP eCLIP14.37□□□□□ -0.11
CAPN3-220ENST00000569827 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-220ENST00000569827 MUM1L1Q5H9M0 696 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 FBXO16Q8IX29 292 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-220ENST00000569827 FAM133AQ8N9E0 248 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 PCSK9Q8NBP7 692 aaKnown RBP14.37□□□□□ -0.11
CAPN3-220ENST00000569827 CHST13Q8NET6 341 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 PPP1R13LQ8WUF5 828 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 MKL1Q969V6 931 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 ACAD9Q9H845 621 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 SPC25Q9HBM1 224 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms