RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	SLC17A8	Q8NDX2	589 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	FERMT2	Q96AC1	680 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	VTI1A	Q96AJ9	217 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	LRCH3	Q96II8	777 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	MAML3	Q96JK9	1138 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	NUP88	Q99567	741 aa	Predicted RBP	10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	GDF15	Q99988	308 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	KRTAP3-3	Q9BYR6	98 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	KRTAP3-2	Q9BYR7	98 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	XPNPEP3	Q9NQH7	507 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	FBXO28	Q9NVF7	368 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784		A0A0G2JMZ2	1700 aa		10.15	□□□□□ -0.78
SCAPER-223	ENST00000569784	TSPY2	A6NKD2	308 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	GSG1L2	A8MUP6	293 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784		F5H6K3	240 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	COBL	O75128	1261 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	COL6A1	P12109	1028 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	RASA1	P20936	1047 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	KLRC3	Q07444	240 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	ANKRD45	Q5TZF3	282 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	IFNL3	Q8IZI9	196 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	ANKRD35	Q8N283	1001 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	DEFB123	Q8N688	67 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	OSBP2	Q969R2	916 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	CHMP4C	Q96CF2	233 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	TEX13B	Q9BXU2	312 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	SPC25	Q9HBM1	224 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	NYAP2	Q9P242	653 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	MTMR7	Q9Y216	660 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	PARP14	Q460N5	1801 aa		10.14	□□□□□ -0.79
SCAPER-223	ENST00000569784	SMIM22	K7EJ46	135 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784		M0R2C6	588 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	TTLL1	O95922	423 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	NDUFB10	O96000	172 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	AKR1A1	P14550	325 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	MX1	P20591	662 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	ADCYAP1R1	P41586	468 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	TFAP4	Q01664	338 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	C6orf132	Q5T0Z8	1188 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	SLFN13	Q68D06	897 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	SLC39A5	Q6ZMH5	540 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	NOL8	Q76FK4	1167 aa	Known RBP	10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	SIAH1	Q8IUQ4	282 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	LRRC47	Q8N1G4	583 aa	Known RBP	10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	TRPV1	Q8NER1	839 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	YTHDC1	Q96MU7	727 aa	Known RBP	10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	TINF2	Q9BSI4	451 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	PRO3102	Q9H379	93 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	FBXO40	Q9UH90	709 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	FEM1B	Q9UK73	627 aa		10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	DIS3	Q9Y2L1	958 aa	Known RBP	10.13	□□□□□ -0.79
SCAPER-223	ENST00000569784	RLF	Q13129	1914 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	TRIM6-TRIM34	B2RNG4	842 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	SOX1	O00570	391 aa	Predicted RBP	10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	RANBP6	O60518	1105 aa	Known RBP	10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	BMP3	P12645	472 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	COL9A1	P20849	921 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	PPARA	Q07869	468 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	LRRC41	Q15345	812 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	TRIM60	Q495X7	471 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	FAM47A	Q5JRC9	791 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	DMRTA1	Q5VZB9	504 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	CHURC1	Q8WUH1	139 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	NUP133	Q8WUM0	1156 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	CEP95	Q96GE4	821 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	CDHR5	Q9HBB8	845 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	RAVER2	Q9HCJ3	691 aa	Known RBP	10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	HOMER2	Q9NSB8	354 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	NRBP1	Q9UHY1	535 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	FAM184B	Q9ULE4	1060 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	STX8	Q9UNK0	236 aa		10.12	□□□□□ -0.79
SCAPER-223	ENST00000569784	BRCA2	P51587	3418 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	TMEM232	C9JQI7	657 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	PGK1	P00558	417 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	FDX1	P10109	184 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	SLC1A4	P43007	532 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	STAT2	P52630	851 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	CCDC96	Q2M329	555 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	LRIT3	Q3SXY7	679 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	RRP12	Q5JTH9	1297 aa	Known RBP	10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	FAM160B2	Q86V87	743 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	SEC62	Q99442	399 aa	Known RBP	10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	MTMR4	Q9NYA4	1195 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	ROBO3	Q96MS0	1386 aa		10.11	□□□□□ -0.79
SCAPER-223	ENST00000569784	DCDC2C	A8MYV0	355 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	ARHGAP33	O14559	1287 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	MAP3K7	O43318	606 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	PQBP1	O60828	265 aa	Known RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	C6orf222	P0C671	652 aa	Predicted RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	RAG1	P15918	1043 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	RRP1	P56182	461 aa	Known RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	ZNF792	Q3KQV3	632 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	ZNF697	Q5TEC3	545 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	MSL3	Q8N5Y2	521 aa	Known RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	CHST13	Q8NET6	341 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	RILPL2	Q969X0	211 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	EVI5L	Q96CN4	794 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	KCNK17	Q96T54	332 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms