RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 SYDE2Q5VT97 1194 aa19.54■□□□□ 0.72
EDC3-216ENST00000569561 PAWRQ96IZ0 340 aaKnown RBP19.54■□□□□ 0.72
EDC3-216ENST00000569561 TINF2Q9BSI4 451 aa19.54■□□□□ 0.72
EDC3-216ENST00000569561 NRBP1Q9UHY1 535 aa19.54■□□□□ 0.72
EDC3-216ENST00000569561 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
EDC3-216ENST00000569561 CTDP1Q9Y5B0 961 aaPredicted RBP19.54■□□□□ 0.72
EDC3-216ENST00000569561 MSCO60682 206 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 ICAM1P05362 532 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 COL6A1P12109 1028 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
EDC3-216ENST00000569561 MAMDC4Q6UXC1 1216 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 ZNF467Q7Z7K2 595 aaPredicted RBP19.53■□□□□ 0.72
EDC3-216ENST00000569561 MSL3Q8N5Y2 521 aaKnown RBP19.53■□□□□ 0.72
EDC3-216ENST00000569561 PNMA1Q8ND90 353 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 ACAD9Q9H845 621 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 GPCPD1Q9NPB8 672 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 RNF146Q9NTX7 359 aa19.53■□□□□ 0.72
EDC3-216ENST00000569561 RBM8AQ9Y5S9 174 aaKnown RBP19.53■□□□□ 0.72
EDC3-216ENST00000569561 PFASO15067 1338 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 SEPT4O43236 478 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 PRAMEF19Q5SWL8 479 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
EDC3-216ENST00000569561 CCDC174Q6PII3 467 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 NECAB2Q7Z6G3 386 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 FAM133AQ8N9E0 248 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 A1CFQ9NQ94 594 aaKnown RBP19.52■□□□□ 0.72
EDC3-216ENST00000569561 FRMPD3Q5JV73 1810 aa19.52■□□□□ 0.72
EDC3-216ENST00000569561 ZNFX1Q9P2E3 1918 aaKnown RBP19.52■□□□□ 0.72
EDC3-216ENST00000569561 SYNGAP1Q96PV0 1343 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 E7EWF7 191 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 ZNF865P0CJ78 1059 aaPredicted RBP19.51■□□□□ 0.71
EDC3-216ENST00000569561 MUM1L1Q5H9M0 696 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 HTATIP2Q9BUP3 242 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 HOMER2Q9NSB8 354 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 ASTN1O14525 1302 aa19.51■□□□□ 0.71
EDC3-216ENST00000569561 SNAI1O95863 264 aaPredicted RBP19.5■□□□□ 0.71
EDC3-216ENST00000569561 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 ANTXR2P58335 489 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 MB21D2Q8IYB1 491 aaPredicted RBP19.5■□□□□ 0.71
EDC3-216ENST00000569561 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 TRERF1Q96PN7 1200 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 UBAC1Q9BSL1 405 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 CCPG1Q9ULG6 757 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 PLXNA1Q9UIW2 1896 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 WDR19Q8NEZ3 1342 aa19.5■□□□□ 0.71
EDC3-216ENST00000569561 GOLGA8HP0CJ92 632 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 ALAS1P13196 640 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 CNTN2Q02246 1040 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
EDC3-216ENST00000569561 ANKRD35Q8N283 1001 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 CPVLQ9H3G5 476 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 C11orf49Q9H6J7 331 aa19.49■□□□□ 0.71
EDC3-216ENST00000569561 SOWAHBA6NEL2 793 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 CNGA1P29973 690 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 NECTIN1Q15223 517 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 ASPRV1Q53RT3 343 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 IFIT1BQ5T764 474 aaKnown RBP19.48■□□□□ 0.71
EDC3-216ENST00000569561 NCOA7Q8NI08 942 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 CLEC4DQ8WXI8 215 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 UBA5Q9GZZ9 404 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 SENP2Q9HC62 589 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 CYP39A1Q9NYL5 469 aa19.48■□□□□ 0.71
EDC3-216ENST00000569561 ALPK3Q96L96 1907 aa19.47■□□□□ 0.71
EDC3-216ENST00000569561 H0YGN5 161 aa19.47■□□□□ 0.71
EDC3-216ENST00000569561 TRDNQ13061 729 aa19.47■□□□□ 0.71
EDC3-216ENST00000569561 CEP290O15078 2479 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 SMCHD1A6NHR9 2005 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 DNM1LO00429 736 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 NFIBO00712 420 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 SLC27A2O14975 620 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 IGDCC4Q8TDY8 1250 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 DPF3Q92784 378 aa19.46■□□□□ 0.71
EDC3-216ENST00000569561 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
EDC3-216ENST00000569561 LCTP09848 1927 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 CDC45O75419 566 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 CREB3L3Q68CJ9 461 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 KIAA1211Q6ZU35 1233 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 ARMCX2Q7L311 632 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
EDC3-216ENST00000569561 ADGRF4Q8IZF3 695 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 STAG2Q8N3U4 1231 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 MTMR8Q96EF0 704 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 MAD2L2Q9UI95 211 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 PNMA2Q9UL42 364 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 CNPY2Q9Y2B0 182 aa19.45■□□□□ 0.7
EDC3-216ENST00000569561 PALM3A6NDB9 673 aaPredicted RBP19.44■□□□□ 0.7
EDC3-216ENST00000569561 IFIT3O14879 490 aaKnown RBP19.44■□□□□ 0.7
EDC3-216ENST00000569561 ADCY6O43306 1168 aa19.44■□□□□ 0.7
EDC3-216ENST00000569561 PARP1P09874 1014 aaKnown RBP19.44■□□□□ 0.7
EDC3-216ENST00000569561 AKR1A1P14550 325 aa19.44■□□□□ 0.7
EDC3-216ENST00000569561 TROAPQ12815 778 aa19.44■□□□□ 0.7
EDC3-216ENST00000569561 CCDC144CPQ8IYA2 1237 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms