RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 CAGE1Q8TC20 777 aa24.13■■□□□ 1.45
DENND4A-208ENST00000568515 GDAP1L1Q96MZ0 367 aa24.13■■□□□ 1.45
DENND4A-208ENST00000568515 EIF3CQ99613 913 aaKnown RBP24.13■■□□□ 1.45
DENND4A-208ENST00000568515 NUP58Q9BVL2 599 aa24.13■■□□□ 1.45
DENND4A-208ENST00000568515 NHEJ1Q9H9Q4 299 aaPredicted RBP24.13■■□□□ 1.45
DENND4A-208ENST00000568515 EXOC1Q9NV70 894 aa24.13■■□□□ 1.45
DENND4A-208ENST00000568515 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
DENND4A-208ENST00000568515 CACNA1SQ13698 1873 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 ANO9A1A5B4 782 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 PPFIA4O75335 1185 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 CCDC170Q8IYT3 715 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 GIMAP8Q8ND71 665 aaPredicted RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 NOC3LQ8WTT2 800 aaKnown RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 RIN2Q8WYP3 895 aaPredicted RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 TUBGCP2Q9BSJ2 902 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 EFCC1Q9HA90 598 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 RASSF10A6NK89 507 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 PDE2AO00408 941 aaPredicted RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 ZNF185O15231 689 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 ORC4O43929 436 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 RHOBTB3O94955 611 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 IPO7O95373 1038 aaKnown RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 TRIM21P19474 475 aaKnown RBP24.12■■□□□ 1.45
DENND4A-208ENST00000568515 FAM47AQ5JRC9 791 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 DTHD1Q6ZMT9 781 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 RASSF8Q8NHQ8 419 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 CRACR2AQ9BSW2 395 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 FAM205AQ6ZU69 1335 aa24.12■■□□□ 1.45
DENND4A-208ENST00000568515 GGCXP38435 758 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 EVX2Q03828 476 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 RETREG2Q8NC44 543 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 MYL1P05976 194 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 MYBL2P10244 700 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 ZNF384Q8TF68 577 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 SELENOOQ9BVL4 669 aa24.11■■□□□ 1.45
DENND4A-208ENST00000568515 PP2D1A8MPX8 630 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 ZBED6P86452 979 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 GSPT2Q8IYD1 628 aaKnown RBP24.1■■□□□ 1.45
DENND4A-208ENST00000568515 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
DENND4A-208ENST00000568515 PURBQ96QR8 312 aaKnown RBP24.1■■□□□ 1.45
DENND4A-208ENST00000568515 DUSP9Q99956 384 aaKnown RBP24.1■■□□□ 1.45
DENND4A-208ENST00000568515 DUSP10Q9Y6W6 482 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 COL1A1P02452 1464 aaPredicted RBP24.1■■□□□ 1.45
DENND4A-208ENST00000568515 CORO7P57737 925 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 TBC1D8BQ0IIM8 1120 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 CSGALNACT2Q8N6G5 542 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 PLEKHA4Q9H4M7 779 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 KBTBD4Q9NVX7 518 aa24.1■■□□□ 1.45
DENND4A-208ENST00000568515 AGPSO00116 658 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 NOP2P46087 812 aaKnown RBP24.09■■□□□ 1.45
DENND4A-208ENST00000568515 KLK7P49862 253 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 SEMA3FQ13275 785 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 DHTKD1Q96HY7 919 aaPredicted RBP24.09■■□□□ 1.45
DENND4A-208ENST00000568515 JADE2Q9NQC1 790 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 IDEP14735 1019 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 UBA7P41226 1012 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 PARP10Q53GL7 1025 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 RASGRP4Q8TDF6 673 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 PLIN2Q99541 437 aa24.09■■□□□ 1.45
DENND4A-208ENST00000568515 WTIPA6NIX2 430 aaPredicted RBP24.08■■□□□ 1.45
DENND4A-208ENST00000568515 KIF5BP33176 963 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 IQCEQ6IPM2 695 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 TMEM60Q9H2L4 133 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 MACROD2A1Z1Q3 448 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 CYP27A1Q02318 531 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 C2orf54Q08AI8 447 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 GPKOWQ92917 476 aaPredicted RBP eCLIP24.08■■□□□ 1.456e-7■■■□□ 17
DENND4A-208ENST00000568515 CCSER1Q9C0I3 900 aa24.08■■□□□ 1.45
DENND4A-208ENST00000568515 KIF5AQ12840 1032 aa24.07■■□□□ 1.44
DENND4A-208ENST00000568515 SH3GLB2Q9NR46 395 aa24.07■■□□□ 1.44
DENND4A-208ENST00000568515 SECISBP2LQ93073 1101 aaKnown RBP24.07■■□□□ 1.44
DENND4A-208ENST00000568515 EEF2KMTQ96G04 330 aa24.07■■□□□ 1.44
DENND4A-208ENST00000568515 NTSR2O95665 410 aa24.07■■□□□ 1.44
DENND4A-208ENST00000568515 VAV2P52735 878 aa24.07■■□□□ 1.44
DENND4A-208ENST00000568515 PCMTD1Q96MG8 357 aaPredicted RBP24.07■■□□□ 1.44
DENND4A-208ENST00000568515 CCDC194A0A1B0GVG4 234 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 CDK17Q00537 523 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 FNBP4Q8N3X1 1017 aaPredicted RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 P2RX5Q93086 422 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 TSGA10Q9BZW7 698 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 NUTM2BA6NNL0 878 aaPredicted RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 NUTM2EB1AL46 878 aaPredicted RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 ANKRD65E5RJM6 399 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 SHOX2O60902 331 aaPredicted RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 CCNE1P24864 410 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 CAVIN4Q5BKX8 364 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 DNAJC21Q5F1R6 531 aaKnown RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 RCSD1Q6JBY9 416 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 CCDC70Q6NSX1 233 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 FAM76AQ8TAV0 307 aa24.06■■□□□ 1.44
DENND4A-208ENST00000568515 AENQ8WTP8 325 aaKnown RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 CNOT6LQ96LI5 555 aaKnown RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 DCP1AQ9NPI6 582 aaPredicted RBP24.06■■□□□ 1.44
DENND4A-208ENST00000568515 ABCA3Q99758 1704 aa24.05■■□□□ 1.44
DENND4A-208ENST00000568515 GOLGA6BA6NDN3 693 aa24.05■■□□□ 1.44
DENND4A-208ENST00000568515 M0R2N6 131 aa24.05■■□□□ 1.44
DENND4A-208ENST00000568515 UBE4AQ14139 1066 aa24.05■■□□□ 1.44
DENND4A-208ENST00000568515 ANKRD40Q6AI12 368 aa24.05■■□□□ 1.44
DENND4A-208ENST00000568515 INTS5Q6P9B9 1019 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms