RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 SPICE1Q8N0Z3 855 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 SLC44A5Q8NCS7 719 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 ARRDC4Q8NCT1 418 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 SHCBP1Q8NEM2 672 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 DIS3LQ8TF46 1054 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 USP6NLQ92738 828 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 SPATC1LQ9H0A9 340 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 ALG2Q9H553 416 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 VCPKMTQ9H867 229 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 PRM3Q9NNZ6 103 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 BTBD7Q9P203 1132 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 STAP2Q9UGK3 403 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 TMX2Q9Y320 296 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 DDX60LQ5H9U9 1706 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 TRIOBPQ9H2D6 2365 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 COL11A1P12107 1806 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 TTC41PQ6P2S7 1318 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 ALPK3Q96L96 1907 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 A0A1W2PRG0 241 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 KBTBD13C9JR72 458 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 CNMDO75829 334 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 HOXC6P09630 235 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 EEF2P13639 858 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 AKR1B1P15121 316 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 ADORA2AP29274 412 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 BMP8BP34820 402 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 STAT3P40763 770 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 PDE4BQ07343 736 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 KCTD2Q14681 263 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 SLFNL1Q499Z3 407 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 SBK1Q52WX2 424 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 PPP4R3BQ5MIZ7 849 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 OLFML2BQ68BL8 750 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 DHX37Q8IY37 1157 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 ABRAQ8N0Z2 381 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 STK11IPQ8N1F8 1099 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 KBTBD3Q8NAB2 608 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 APPBP2Q92624 585 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 STRBPQ96SI9 672 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 MMP19Q99542 508 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 LBHD1Q9BQE6 289 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 MOV10L1Q9BXT6 1211 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 UBE2OQ9C0C9 1292 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 SENP6Q9GZR1 1112 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 LIMD1Q9UGP4 676 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 DDX20Q9UHI6 824 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 ISY1Q9ULR0 285 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 ZMYND8Q9ULU4 1186 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 PLXNA1Q9UIW2 1896 aa5.55□□□□□ -1.52
HERPUD1-213ENST00000568358 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 PALM3A6NDB9 673 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 VWA5AO00534 786 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 SEPT4O43236 478 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 GPAA1O43292 621 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 ZBED4O75132 1171 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 TSPY3P0CV98 308 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 TSPY8P0CW00 308 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 SYN1P17600 705 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 CYP2C19P33261 490 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 SLC4A3P48751 1232 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 ELOAQ14241 798 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 TSR1Q2NL82 804 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 FAM83BQ5T0W9 1011 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 ANKRD45Q5TZF3 282 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 PHLDB3Q6NSJ2 640 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 NPLOC4Q8TAT6 608 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 UBXN4Q92575 508 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 SLF1Q9BQI6 1058 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 FSD1Q9BTV5 496 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 NAPBQ9H115 298 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 NYAP2Q9P242 653 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 CLIP2Q9UDT6 1046 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 LHX6Q9UPM6 363 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 RLFQ13129 1914 aa5.54□□□□□ -1.52
HERPUD1-213ENST00000568358 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 FRMPD3Q5JV73 1810 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 GSG1L2A8MUP6 293 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 F5H6K3 240 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 DNM1LO00429 736 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 SPTLC1O15269 473 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 COBLO75128 1261 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 TTLL1O95922 423 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 FDX1P10109 184 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 RARBP10826 455 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 NCLP19338 710 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 MX1P20591 662 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 KLRC3Q07444 240 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 TMEM132BQ14DG7 1078 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 KIAA1755Q5JYT7 1200 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 POTEEQ6S8J3 1075 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 RNF180Q86T96 592 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 RIOX2Q8IUF8 465 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 SIAH1Q8IUQ4 282 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 IFNL3Q8IZI9 196 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms