RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 PSMA5P28066 241 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 ADORA2AP29274 412 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 RGS2P41220 211 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 LIFRP42702 1097 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 EXOSC10Q01780 885 aaKnown RBP14.84□□□□□ -0.03
GINS3-209ENST00000567909 MAP2K5Q13163 448 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 GRB14Q14449 540 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 GRM4Q14833 912 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 NBPF11Q86T75 865 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 RAB11FIP4Q86YS3 637 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 TMTC2Q8N394 836 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 MMP19Q99542 508 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 RANBP17Q9H2T7 1088 aaKnown RBP14.84□□□□□ -0.03
GINS3-209ENST00000567909 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 MAD2L2Q9UI95 211 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 CCPG1Q9ULG6 757 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 ZNF236Q9UL36 1845 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 ZNF536O15090 1300 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 WDR19Q8NEZ3 1342 aa14.84□□□□□ -0.03
GINS3-209ENST00000567909 KLRF2D3W0D1 207 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 STRNO43815 780 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 RXRAP19793 462 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 TROAPQ12815 778 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 ADGRF4Q8IZF3 695 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 USP6NLQ92738 828 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 APBA2Q99767 749 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.04
GINS3-209ENST00000567909 PALM3A6NDB9 673 aaPredicted RBP14.82□□□□□ -0.04
GINS3-209ENST00000567909 DDAH1O94760 285 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 ICAM1P05362 532 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 RPS6KB1P23443 525 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 KCTD2Q14681 263 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 CDC37Q16543 378 aaPredicted RBP14.82□□□□□ -0.04
GINS3-209ENST00000567909 CCL14Q16627 93 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 C8orf34Q49A92 452 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 Q6ZUG5 572 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 CCDC144CPQ8IYA2 1237 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
GINS3-209ENST00000567909 NPLOC4Q8TAT6 608 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 PXYLP1Q8TE99 480 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 TRERF1Q96PN7 1200 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 RNF146Q9NTX7 359 aa14.82□□□□□ -0.04
GINS3-209ENST00000567909 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
GINS3-209ENST00000567909 KIAA0100Q14667 2235 aaKnown RBP14.82□□□□□ -0.04
GINS3-209ENST00000567909 COBLO75128 1261 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 INHAP05111 366 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 PGK2P07205 417 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
GINS3-209ENST00000567909 KIF5BP33176 963 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 USH1GQ495M9 461 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 SGMS1Q86VZ5 419 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 ANKRD35Q8N283 1001 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 TRIB2Q92519 343 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 DDX11Q96FC9 970 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 ZNF333Q96JL9 665 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 ACAD9Q9H845 621 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 JMJD4Q9H9V9 463 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 FBXO40Q9UH90 709 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 MCM3APO60318 1980 aa14.81□□□□□ -0.04
GINS3-209ENST00000567909 KLF18A0A0U1RQI7 1052 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 HMGCRP04035 888 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 CALM1P0DP23 149 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 CALM2P0DP24 149 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 CALM3P0DP25 149 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 UBXN2AP68543 259 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 TRIM32Q13049 653 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 MTFR1Q15390 333 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 APOA5Q6Q788 366 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
GINS3-209ENST00000567909 SLC5A4Q9NY91 659 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 BRPF3Q9ULD4 1205 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
GINS3-209ENST00000567909 ZBTB43O43298 467 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 HOXC6P09630 235 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 SOX10P56693 466 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 APOBRQ0VD83 1088 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 SLC35G1Q2M3R5 365 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 QRICH1Q2TAL8 776 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 NSMFQ6X4W1 530 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 RBBP6Q7Z6E9 1792 aaKnown RBP14.79□□□□□ -0.04
GINS3-209ENST00000567909 TRMT44Q8IYL2 757 aaKnown RBP14.79□□□□□ -0.04
GINS3-209ENST00000567909 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 BRF1Q92994 677 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 MAP3K14Q99558 947 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 ZSWIM6Q9HCJ5 1215 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
GINS3-209ENST00000567909 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 GNAQP50148 359 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms