RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
COMMD4-217ENST00000567195 RNF208Q9H0X6 261 aa18.3■□□□□ 0.52
COMMD4-217ENST00000567195 ZNF536O15090 1300 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 COBLO75128 1261 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 ICAM1P05362 532 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
COMMD4-217ENST00000567195 ALAS1P13196 640 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 HSPA4P34932 840 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 CCL14Q16627 93 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 MFSD14CQ5VZR4 134 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 NFXL1Q6ZNB6 911 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 RASEFQ8IZ41 740 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 DDX11Q96FC9 970 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 HOMER2Q9NSB8 354 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 CCPG1Q9ULG6 757 aa18.29■□□□□ 0.52
COMMD4-217ENST00000567195 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
COMMD4-217ENST00000567195 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
COMMD4-217ENST00000567195 ANKRD35Q8N283 1001 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 TRERF1Q96PN7 1200 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 UNC93B1Q9H1C4 597 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 LY9Q9HBG7 655 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-217ENST00000567195 RNF146Q9NTX7 359 aa18.28■□□□□ 0.52
COMMD4-217ENST00000567195 RPTORQ8N122 1335 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 POTEFA5A3E0 1075 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 KLRF2D3W0D1 207 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 SH2B2O14492 632 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-217ENST00000567195 LIFRP42702 1097 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 GRM4Q14833 912 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.27■□□□□ 0.52
COMMD4-217ENST00000567195 DHX32Q7L7V1 743 aaKnown RBP18.27■□□□□ 0.52
COMMD4-217ENST00000567195 ADGRF4Q8IZF3 695 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 KCNB2Q92953 911 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 MAD2L2Q9UI95 211 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 DIS3Q9Y2L1 958 aaKnown RBP18.27■□□□□ 0.52
COMMD4-217ENST00000567195 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
COMMD4-217ENST00000567195 WDR19Q8NEZ3 1342 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 PGK2P07205 417 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 GJB1P08034 283 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
COMMD4-217ENST00000567195 CACNB2Q08289 660 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-217ENST00000567195 TROAPQ12815 778 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 TRIM32Q13049 653 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 ZNF654Q8IZM8 581 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 USP26Q9BXU7 913 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 FLRT1Q9NZU1 646 aa18.26■□□□□ 0.51
COMMD4-217ENST00000567195 PALM3A6NDB9 673 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 DDAH1O94760 285 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 PSMA5P28066 241 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 KIF5BP33176 963 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 CDC37Q16543 378 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 MAP3K21Q5TCX8 1036 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 SYNE3Q6ZMZ3 975 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 MAML3Q96JK9 1138 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 MAP3K14Q99558 947 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 GPHNQ9NQX3 736 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 SLC12A7Q9Y666 1083 aa18.25■□□□□ 0.51
COMMD4-217ENST00000567195 ZNFX1Q9P2E3 1918 aaKnown RBP18.25■□□□□ 0.51
COMMD4-217ENST00000567195 PDE4DIPQ5VU43 2346 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 CALM1P0DP23 149 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 CALM2P0DP24 149 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 CALM3P0DP25 149 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 EN2P19622 333 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-217ENST00000567195 CYP2C19P33261 490 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 FGD1P98174 961 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-217ENST00000567195 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
COMMD4-217ENST00000567195 PFASO15067 1338 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 GJA8P48165 433 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 MUM1L1Q5H9M0 696 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
COMMD4-217ENST00000567195 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 MYL10Q9BUA6 226 aa18.23■□□□□ 0.51
COMMD4-217ENST00000567195 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
COMMD4-217ENST00000567195 PAK6Q9NQU5 681 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-217ENST00000567195 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
COMMD4-217ENST00000567195 SGPL1O95470 568 aa18.22■□□□□ 0.51
COMMD4-217ENST00000567195 TFRCP02786 760 aaKnown RBP18.22■□□□□ 0.51
COMMD4-217ENST00000567195 GNAQP50148 359 aa18.22■□□□□ 0.51
COMMD4-217ENST00000567195 USH1GQ495M9 461 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms