RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 OGDHLQ9ULD0 1010 aa22.66■■□□□ 1.22
CCDC113-204ENST00000566498 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
CCDC113-204ENST00000566498 ZNF536O15090 1300 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 TNKSO95271 1327 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 ZNF543Q08ER8 600 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 PRPF38BQ5VTL8 546 aaKnown RBP22.65■■□□□ 1.22
CCDC113-204ENST00000566498 BTNL9Q6UXG8 535 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 TRPV1Q8NER1 839 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 TINF2Q9BSI4 451 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 ESYT1Q9BSJ8 1104 aa22.65■■□□□ 1.22
CCDC113-204ENST00000566498 DDX20Q9UHI6 824 aaKnown RBP22.65■■□□□ 1.22
CCDC113-204ENST00000566498 RBM8AQ9Y5S9 174 aaKnown RBP22.65■■□□□ 1.22
CCDC113-204ENST00000566498 IGHA2P01877 340 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 GOLGA8HP0CJ92 632 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 TKFCQ3LXA3 575 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 IFIT1BQ5T764 474 aaKnown RBP22.64■■□□□ 1.21
CCDC113-204ENST00000566498 RALYLQ86SE5 291 aaKnown RBP22.64■■□□□ 1.21
CCDC113-204ENST00000566498 ACAD9Q9H845 621 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 RNF146Q9NTX7 359 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 CCPG1Q9ULG6 757 aa22.64■■□□□ 1.21
CCDC113-204ENST00000566498 E7EWF7 191 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 MSCO60682 206 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 CYBAP13498 195 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 GPATCH4Q5T3I0 446 aaKnown RBP22.63■■□□□ 1.21
CCDC113-204ENST00000566498 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 CYB5R4Q7L1T6 521 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 NCOA7Q8NI08 942 aa22.63■■□□□ 1.21
CCDC113-204ENST00000566498 DIS3LQ8TF46 1054 aaKnown RBP22.63■■□□□ 1.21
CCDC113-204ENST00000566498 DNAJC25-GNG10A0A024R161 153 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 ICAM1P05362 532 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
CCDC113-204ENST00000566498 SNHG28P0DPA3 235 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 ANO1Q5XXA6 986 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 UBA5Q9GZZ9 404 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 RANBP17Q9H2T7 1088 aaKnown RBP22.62■■□□□ 1.21
CCDC113-204ENST00000566498 ANO2Q9NQ90 1003 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 PLXNA1Q9UIW2 1896 aa22.62■■□□□ 1.21
CCDC113-204ENST00000566498 ERICH2A1L162 156 aa22.61■■□□□ 1.21
CCDC113-204ENST00000566498 IFIT3O14879 490 aaKnown RBP22.61■■□□□ 1.21
CCDC113-204ENST00000566498 LSG1Q9H089 658 aaKnown RBP22.61■■□□□ 1.21
CCDC113-204ENST00000566498 CNPY2Q9Y2B0 182 aa22.61■■□□□ 1.21
CCDC113-204ENST00000566498 TAF6LQ9Y6J9 622 aa22.61■■□□□ 1.21
CCDC113-204ENST00000566498 POTEB2H3BUK9 544 aa22.6■■□□□ 1.21
CCDC113-204ENST00000566498 SEPT4O43236 478 aa22.6■■□□□ 1.21
CCDC113-204ENST00000566498 MYCNP04198 464 aaPredicted RBP22.6■■□□□ 1.21
CCDC113-204ENST00000566498 PARP1P09874 1014 aaKnown RBP22.6■■□□□ 1.21
CCDC113-204ENST00000566498 MUM1L1Q5H9M0 696 aa22.6■■□□□ 1.21
CCDC113-204ENST00000566498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC113-204ENST00000566498 CHST3Q7LGC8 479 aa22.6■■□□□ 1.21
CCDC113-204ENST00000566498 C11orf49Q9H6J7 331 aa22.6■■□□□ 1.21
CCDC113-204ENST00000566498 SART3Q15020 963 aaKnown RBP22.59■■□□□ 1.21
CCDC113-204ENST00000566498 MSL3Q8N5Y2 521 aaKnown RBP22.59■■□□□ 1.21
CCDC113-204ENST00000566498 CPVLQ9H3G5 476 aa22.59■■□□□ 1.21
CCDC113-204ENST00000566498 VAT1LQ9HCJ6 419 aa22.59■■□□□ 1.21
CCDC113-204ENST00000566498 A1CFQ9NQ94 594 aaKnown RBP22.59■■□□□ 1.21
CCDC113-204ENST00000566498 NRBP1Q9UHY1 535 aa22.59■■□□□ 1.21
CCDC113-204ENST00000566498 DHX16O60231 1041 aaKnown RBP22.58■■□□□ 1.21
CCDC113-204ENST00000566498 EVI5O60447 810 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 TAL1P17542 331 aaPredicted RBP22.58■■□□□ 1.21
CCDC113-204ENST00000566498 MNX1P50219 401 aaPredicted RBP22.58■■□□□ 1.21
CCDC113-204ENST00000566498 CNTN2Q02246 1040 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 SEC23AQ15436 765 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 ASPRV1Q53RT3 343 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 NSMFQ6X4W1 530 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 STOX1Q6ZVD7 989 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 ZNF467Q7Z7K2 595 aaPredicted RBP22.58■■□□□ 1.21
CCDC113-204ENST00000566498 ARRDC4Q8NCT1 418 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 PNMA2Q9UL42 364 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 NR2E3Q9Y5X4 410 aa22.58■■□□□ 1.21
CCDC113-204ENST00000566498 PFASO15067 1338 aa22.57■■□□□ 1.2
CCDC113-204ENST00000566498 H0YGN5 161 aa22.57■■□□□ 1.2
CCDC113-204ENST00000566498 CDC45O75419 566 aa22.57■■□□□ 1.2
CCDC113-204ENST00000566498 MAMDC4Q6UXC1 1216 aa22.57■■□□□ 1.2
CCDC113-204ENST00000566498 SYNGAP1Q96PV0 1343 aa22.57■■□□□ 1.2
CCDC113-204ENST00000566498 SLC27A2O14975 620 aa22.56■■□□□ 1.2
CCDC113-204ENST00000566498 SNAI1O95863 264 aaPredicted RBP22.56■■□□□ 1.2
CCDC113-204ENST00000566498 WTAPQ15007 396 aa22.56■■□□□ 1.2
CCDC113-204ENST00000566498 TMEM67Q5HYA8 995 aa22.56■■□□□ 1.2
CCDC113-204ENST00000566498 GJC2Q5T442 439 aaPredicted RBP22.56■■□□□ 1.2
CCDC113-204ENST00000566498 ADGRF4Q8IZF3 695 aa22.56■■□□□ 1.2
CCDC113-204ENST00000566498 SMCHD1A6NHR9 2005 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 ZNF865P0CJ78 1059 aaPredicted RBP22.55■■□□□ 1.2
CCDC113-204ENST00000566498 RARBP10826 455 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 NECTIN1Q15223 517 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 CREB3L3Q68CJ9 461 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 FAM133AQ8N9E0 248 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 SENP6Q9GZR1 1112 aaPredicted RBP22.55■■□□□ 1.2
CCDC113-204ENST00000566498 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.55■■□□□ 1.2
CCDC113-204ENST00000566498 PPP4R2Q9NY27 417 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 CYP39A1Q9NYL5 469 aa22.55■■□□□ 1.2
CCDC113-204ENST00000566498 ZHX1Q9UKY1 873 aaPredicted RBP22.55■■□□□ 1.2
CCDC113-204ENST00000566498 PTPDC1A2A3K4 754 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 SOWAHBA6NEL2 793 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 ACVR2BQ13705 512 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 BAATQ14032 418 aaPredicted RBP22.54■■□□□ 1.2
CCDC113-204ENST00000566498 USH1GQ495M9 461 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 RNF20Q5VTR2 975 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 ARMCX2Q7L311 632 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 CCDC144CPQ8IYA2 1237 aa22.54■■□□□ 1.2
CCDC113-204ENST00000566498 STAG2Q8N3U4 1231 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms