RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 TCP11L1Q9NUJ3 509 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 PRR12Q9ULL5 1215 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 NEDD4P46934 1319 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 SYNGAP1Q96PV0 1343 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 SOX1O00570 391 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 PGK1P00558 417 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 AKR1A1P14550 325 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 BMP8BP34820 402 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 ADCYAP1R1P41586 468 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 RTP1P59025 263 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 TTBK2Q6IQ55 1244 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 CCDC174Q6PII3 467 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 MFSD6Q6ZSS7 791 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 IL25Q9H293 177 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 A1CFQ9NQ94 594 aaKnown RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
CMTM3-209ENST00000565003 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
CMTM3-209ENST00000565003 MCM3APO60318 1980 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
CMTM3-209ENST00000565003 ALAS1P13196 640 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
CMTM3-209ENST00000565003 SLC16A2P36021 539 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 SNX17Q15036 470 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 FAM133AQ8N9E0 248 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
CMTM3-209ENST00000565003 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
CMTM3-209ENST00000565003 PHF24Q9UPV7 400 aa11.83□□□□□ -0.52
CMTM3-209ENST00000565003 HIP1O00291 1037 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ZNF213O14771 459 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ADCY6O43306 1168 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ADAMTS4O75173 837 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 PDHBP11177 359 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
CMTM3-209ENST00000565003 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 TRIM60Q495X7 471 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 MUM1L1Q5H9M0 696 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ARMCX2Q7L311 632 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 CCDC144CPQ8IYA2 1237 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 KATNBL1Q9H079 304 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
CMTM3-209ENST00000565003 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
CMTM3-209ENST00000565003 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ATP11BQ9Y2G3 1177 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 ASTN1O14525 1302 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 SYNRGQ9UMZ2 1314 aa11.82□□□□□ -0.52
CMTM3-209ENST00000565003 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 ICAM1P05362 532 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 SNHG28P0DPA3 235 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
CMTM3-209ENST00000565003 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 TTC22Q5TAA0 569 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 SYDE2Q5VT97 1194 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 RNF180Q86T96 592 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 ESR2Q92731 530 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 ZKSCAN3Q9BRR0 538 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
CMTM3-209ENST00000565003 CCPG1Q9ULG6 757 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
CMTM3-209ENST00000565003 LCTP09848 1927 aa11.81□□□□□ -0.52
CMTM3-209ENST00000565003 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
CMTM3-209ENST00000565003 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 B4E1Z4 1266 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 KDM4AO75164 1064 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 ZNF543Q08ER8 600 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 CCDC144BQ3MJ40 725 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 C1orf53Q5VUE5 145 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
CMTM3-209ENST00000565003 TDHQ8IZJ6 230 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 TTC14Q96N46 770 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 ABHD16BQ9H3Z7 469 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 CYP39A1Q9NYL5 469 aa11.8□□□□□ -0.52
CMTM3-209ENST00000565003 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.79□□□□□ -0.52
CMTM3-209ENST00000565003 NFIBO00712 420 aa11.79□□□□□ -0.52
CMTM3-209ENST00000565003 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms