RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 DAPK1P53355 1430 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PTCH1Q13635 1447 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ATP7BP35670 1465 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 MYO5CQ9NQX4 1742 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 POTEMA6NI47 508 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SPECC1L-ADORA2AF8WAN1 911 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 EIF3FO00303 357 aaPredicted RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 IFIT3O14879 490 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SART1O43290 800 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PPIP5K2O43314 1243 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CBFA2T3O75081 653 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 HIP1RO75146 1068 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PHACTR2O75167 634 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 GSPT1P15170 499 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 GGCXP38435 758 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 MTTPP55157 894 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ITGA9Q13797 1035 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 KPNB1Q14974 876 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SAFBQ15424 915 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 TAF11Q15544 211 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ANKRD20A2Q5SQ80 823 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 TMCO4Q5TGY1 634 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ANKRD20A1Q5TYW2 823 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 GKAP1Q5VSY0 366 aaPredicted RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ANKRD20A3Q5VUR7 823 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 POTEAQ6S8J7 498 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SLC15A3Q8IY34 581 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 LSMEM2Q8N112 164 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 DEPTORQ8TB45 409 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CAVIN3Q969G5 261 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 AZIN2Q96A70 460 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SKA1Q96BD8 255 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 DHX58Q96C10 678 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 STAMBPL1Q96FJ0 436 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 IFT43Q96FT9 208 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 HIC2Q96JB3 615 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 GSDMAQ96QA5 445 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PNKPQ96T60 521 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 HNRNPABQ99729 332 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 NAPGQ99747 312 aaPredicted RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SLC39A3Q9BRY0 314 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CENPKQ9BS16 269 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 NACAP1Q9BZK3 213 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC68Q9H2F9 335 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 NDST4Q9H3R1 872 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CLK4Q9HAZ1 481 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PREBQ9HCU5 417 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 TIMMDC1Q9NPL8 285 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 RRP7BPQ9NSQ0 103 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PCMTD2Q9NV79 361 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SAP30BPQ9UHR5 308 aaKnown RBP6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PPP1R9AQ9ULJ8 1098 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 PRELID1Q9Y255 219 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 SUGT1Q9Y2Z0 365 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 NUP155O75694 1391 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 CARMIL1Q5VZK9 1371 aa6.94□□□□□ -1.3
PTPN9-204ENST00000564970 TCHHQ07283 1943 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 OVOS2A0A0G2JMS6 1433 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CD109Q6YHK3 1445 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 SENP3-EIF4A1A0A087X0R7 540 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 DPPA5A6NC42 116 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 GMNCA6NCL1 334 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 E7EVH7 732 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 MATN2O00339 956 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF202O95125 648 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CLTAP09496 248 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 POTEIP0CG38 1075 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 KRT4P19013 534 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 MDH1P40925 334 aaKnown RBP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 SKIV2L2P42285 1042 aaKnown RBP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 EPHB4P54760 987 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 GSTM4Q03013 218 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 FAM160A1Q05DH4 1040 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 PTK7Q13308 1070 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 LSAMPQ13449 338 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 BIRC3Q13489 604 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 SAFB2Q14151 953 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 WTAPQ15007 396 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 GALNT17Q6IS24 598 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 UNC13DQ70J99 1090 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 HOOK3Q86VS8 718 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 DHX40Q8IX18 779 aaKnown RBP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 MREGQ8N565 214 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 ATP8B4Q8TF62 1192 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 TAF4BQ92750 862 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CENPTQ96BT3 561 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CYFIP2Q96F07 1278 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 EPSTI1Q96J88 318 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 SPATA32Q96LK8 384 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 GBP5Q96PP8 586 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 RAB3IPQ96QF0 476 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms