RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
RNF40-205ENST00000563909 GRIN2DO15399 1336 aa19.21■□□□□ 0.67
RNF40-205ENST00000563909 DNAJC25-GNG10A0A024R161 153 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 B4GALT4O60513 344 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 ZNF467Q7Z7K2 595 aaPredicted RBP19.2■□□□□ 0.66
RNF40-205ENST00000563909 FAM178BQ8IXR5 827 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 GPR108Q9NPR9 543 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 PARP14Q460N5 1801 aa19.2■□□□□ 0.66
RNF40-205ENST00000563909 CABYRO75952 493 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 GNAI2P04899 355 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 AKR1B1P15121 316 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 SNRNP48Q6IEG0 339 aaKnown RBP19.19■□□□□ 0.66
RNF40-205ENST00000563909 NOL8Q76FK4 1167 aaKnown RBP19.19■□□□□ 0.66
RNF40-205ENST00000563909 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 AGBL1Q96MI9 1066 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 RIOK1Q9BRS2 568 aaKnown RBP19.19■□□□□ 0.66
RNF40-205ENST00000563909 TEX13BQ9BXU2 312 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 KCNH6Q9H252 994 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 RIPK3Q9Y572 518 aa19.19■□□□□ 0.66
RNF40-205ENST00000563909 USP34Q70CQ2 3546 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 PNMA6EA0A0J9YXQ4 647 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 RAD21O60216 631 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 LPXNO60711 386 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 PFKMP08237 780 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 NKX3-2P78367 333 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
RNF40-205ENST00000563909 MAGEB6P1A0A0J9YX57 407 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 CYP2D6P10635 497 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 ACTN1P12814 892 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 ARMCX2Q7L311 632 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 SPRED2Q7Z698 418 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 DYNLL2Q96FJ2 89 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 SEZ6LQ9BYH1 1024 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 SWAP70Q9UH65 585 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 ASTN1O14525 1302 aa19.17■□□□□ 0.66
RNF40-205ENST00000563909 BRWD1Q9NSI6 2320 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 EEF2P13639 858 aaKnown RBP19.16■□□□□ 0.66
RNF40-205ENST00000563909 PSMC6P62333 389 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 TNFAIP2Q03169 654 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 OS9Q13438 667 aaPredicted RBP19.16■□□□□ 0.66
RNF40-205ENST00000563909 FSCN1Q16658 493 aaKnown RBP19.16■□□□□ 0.66
RNF40-205ENST00000563909 FAM83BQ5T0W9 1011 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 HERC6Q8IVU3 1022 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 PHOSPHO2Q8TCD6 241 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 CRNKL1Q9BZJ0 848 aaKnown RBP19.16■□□□□ 0.66
RNF40-205ENST00000563909 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 UBE2ZQ9H832 354 aaPredicted RBP19.16■□□□□ 0.66
RNF40-205ENST00000563909 TRIOO75962 3097 aa19.16■□□□□ 0.66
RNF40-205ENST00000563909 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.15■□□□□ 0.66
RNF40-205ENST00000563909 RLBP1P12271 317 aa19.15■□□□□ 0.66
RNF40-205ENST00000563909 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
RNF40-205ENST00000563909 ANKRD35Q8N283 1001 aa19.15■□□□□ 0.66
RNF40-205ENST00000563909 FGD4Q96M96 766 aa19.15■□□□□ 0.66
RNF40-205ENST00000563909 KATNBL1Q9H079 304 aa19.15■□□□□ 0.66
RNF40-205ENST00000563909 GOPCQ9HD26 462 aa19.15■□□□□ 0.66
RNF40-205ENST00000563909 DBNLQ9UJU6 430 aaKnown RBP19.15■□□□□ 0.66
RNF40-205ENST00000563909 CFAP54Q96N23 3096 aa19.14■□□□□ 0.66
RNF40-205ENST00000563909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.14■□□□□ 0.65
RNF40-205ENST00000563909 CYP2C9P11712 490 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 KCNA5P22460 613 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 LEXMQ3ZCV2 418 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
RNF40-205ENST00000563909 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.14■□□□□ 0.65
RNF40-205ENST00000563909 PANK1Q8TE04 598 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 AP5M1Q9H0R1 490 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 ALDH8A1Q9H2A2 487 aaPredicted RBP19.14■□□□□ 0.65
RNF40-205ENST00000563909 TLR7Q9NYK1 1049 aaKnown RBP19.14■□□□□ 0.65
RNF40-205ENST00000563909 LMCD1Q9NZU5 365 aa19.14■□□□□ 0.65
RNF40-205ENST00000563909 CACNA1AO00555 2505 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 DCXO43602 365 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 ZEB2O60315 1214 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 IL9P15248 144 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 TLK2Q86UE8 772 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 CPXCR1Q8N123 301 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 GDPD5Q8WTR4 605 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 SDR42E1Q8WUS8 393 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 CCDC17Q96LX7 622 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 SLF1Q9BQI6 1058 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 CCDC8Q9H0W5 538 aaPredicted RBP19.13■□□□□ 0.65
RNF40-205ENST00000563909 DCP1AQ9NPI6 582 aaPredicted RBP19.13■□□□□ 0.65
RNF40-205ENST00000563909 TRMT13Q9NUP7 481 aaKnown RBP19.13■□□□□ 0.65
RNF40-205ENST00000563909 NAV1Q8NEY1 1877 aa19.13■□□□□ 0.65
RNF40-205ENST00000563909 DYNC1LI2O43237 492 aaPredicted RBP19.12■□□□□ 0.65
RNF40-205ENST00000563909 PTGS1P23219 599 aa19.12■□□□□ 0.65
RNF40-205ENST00000563909 PTCRAQ6ISU1 281 aaPredicted RBP19.12■□□□□ 0.65
RNF40-205ENST00000563909 PHOX2BQ99453 314 aa19.12■□□□□ 0.65
RNF40-205ENST00000563909 NUP88Q99567 741 aaPredicted RBP19.12■□□□□ 0.65
RNF40-205ENST00000563909 KANSL2Q9H9L4 492 aa19.12■□□□□ 0.65
RNF40-205ENST00000563909 GNEQ9Y223 722 aaKnown RBP19.12■□□□□ 0.65
RNF40-205ENST00000563909 MCM3APO60318 1980 aa19.12■□□□□ 0.65
RNF40-205ENST00000563909 ZNF536O15090 1300 aa19.11■□□□□ 0.65
RNF40-205ENST00000563909 POTEB3A0JP26 581 aa19.11■□□□□ 0.65
RNF40-205ENST00000563909 POTEBQ6S5H4 581 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms