RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ALAS1P13196 640 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 AKR1A1P14550 325 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 ADCYAP1R1P41586 468 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 AKNAD1Q5T1N1 836 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 DCAF4Q8WV16 495 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 ACAD9Q9H845 621 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 PRR12Q9ULL5 1215 aa20.85■□□□□ 0.93
NME3-205ENST00000563854 NEDD4P46934 1319 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 A0A1W2PPC1 479 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 HIP1O00291 1037 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 TOP1P11387 765 aaKnown RBP20.84■□□□□ 0.93
NME3-205ENST00000563854 SLC16A2P36021 539 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 MDM2Q00987 491 aaPredicted RBP20.84■□□□□ 0.93
NME3-205ENST00000563854 TMEM47Q9BQJ4 181 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 UBE2OQ9C0C9 1292 aaKnown RBP20.84■□□□□ 0.93
NME3-205ENST00000563854 RNF41Q9H4P4 317 aaPredicted RBP20.84■□□□□ 0.93
NME3-205ENST00000563854 GPCPD1Q9NPB8 672 aa20.84■□□□□ 0.93
NME3-205ENST00000563854 ZNF536O15090 1300 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 POTEB2H3BUK9 544 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 ZNF213O14771 459 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 SNAI1O95863 264 aaPredicted RBP20.83■□□□□ 0.93
NME3-205ENST00000563854 CNTN2Q02246 1040 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 TTBK2Q6IQ55 1244 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 RNF180Q86T96 592 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
NME3-205ENST00000563854 TRERF1Q96PN7 1200 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 ZKSCAN3Q9BRR0 538 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 PRDM5Q9NQX1 630 aaPredicted RBP20.83■□□□□ 0.93
NME3-205ENST00000563854 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.83■□□□□ 0.93
NME3-205ENST00000563854 PRKAG2Q9UGJ0 569 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 CCPG1Q9ULG6 757 aa20.83■□□□□ 0.93
NME3-205ENST00000563854 PLA2G6O60733 806 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 PDE4AP27815 886 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 BMP8BP34820 402 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 NOVP48745 357 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 TRIM60Q495X7 471 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 SLC39A5Q6ZMH5 540 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 ESR2Q92731 530 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 FGD4Q96M96 766 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 A1CFQ9NQ94 594 aaKnown RBP20.82■□□□□ 0.92
NME3-205ENST00000563854 TCP11L1Q9NUJ3 509 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 DNAH12Q6ZR08 3092 aa20.82■□□□□ 0.92
NME3-205ENST00000563854 LAMA4Q16363 1823 aa20.81■□□□□ 0.92
NME3-205ENST00000563854 SOX1O00570 391 aaPredicted RBP20.81■□□□□ 0.92
NME3-205ENST00000563854 PCP11498 1178 aaKnown RBP20.81■□□□□ 0.92
NME3-205ENST00000563854 TKFCQ3LXA3 575 aa20.81■□□□□ 0.92
NME3-205ENST00000563854 SYDE2Q5VT97 1194 aa20.81■□□□□ 0.92
NME3-205ENST00000563854 MAMDC4Q6UXC1 1216 aa20.81■□□□□ 0.92
NME3-205ENST00000563854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
NME3-205ENST00000563854 ARMCX2Q7L311 632 aa20.81■□□□□ 0.92
NME3-205ENST00000563854 ZNF467Q7Z7K2 595 aaPredicted RBP20.81■□□□□ 0.92
NME3-205ENST00000563854 LBHD1Q9BQE6 289 aaPredicted RBP20.81■□□□□ 0.92
NME3-205ENST00000563854 SYNRGQ9UMZ2 1314 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 SMCHD1A6NHR9 2005 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 NSMFQ6X4W1 530 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 LRCH3Q96II8 777 aa20.8■□□□□ 0.92
NME3-205ENST00000563854 PDHBP11177 359 aa20.79■□□□□ 0.92
NME3-205ENST00000563854 TTC22Q5TAA0 569 aa20.79■□□□□ 0.92
NME3-205ENST00000563854 TDHQ8IZJ6 230 aa20.79■□□□□ 0.92
NME3-205ENST00000563854 PHF24Q9UPV7 400 aa20.79■□□□□ 0.92
NME3-205ENST00000563854 MCM3APO60318 1980 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
NME3-205ENST00000563854 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 KDM4AO75164 1064 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 ICAM1P05362 532 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 GSPT1P15170 499 aaKnown RBP20.78■□□□□ 0.92
NME3-205ENST00000563854 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
NME3-205ENST00000563854 FAM133AQ8N9E0 248 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 DSCC1Q9BVC3 393 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 RANBP17Q9H2T7 1088 aaKnown RBP20.78■□□□□ 0.92
NME3-205ENST00000563854 ABHD16BQ9H3Z7 469 aa20.78■□□□□ 0.92
NME3-205ENST00000563854 DDX49Q9Y6V7 483 aaKnown RBP20.78■□□□□ 0.92
NME3-205ENST00000563854 SZT2Q5T011 3432 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 SOWAHBA6NEL2 793 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 B4E1Z4 1266 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 ADAMTS4O75173 837 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 C6orf222P0C671 652 aaPredicted RBP20.77■□□□□ 0.92
NME3-205ENST00000563854 CCDC144BQ3MJ40 725 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 NOL8Q76FK4 1167 aaKnown RBP20.77■□□□□ 0.92
NME3-205ENST00000563854 IQCA1Q86XH1 822 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 TTC14Q96N46 770 aa20.77■□□□□ 0.92
NME3-205ENST00000563854 MYADML2A6NDP7 307 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 ADCY6O43306 1168 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 DUSP11O75319 330 aaKnown RBP20.76■□□□□ 0.91
NME3-205ENST00000563854 GOLGA8HP0CJ92 632 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
NME3-205ENST00000563854 ZNF543Q08ER8 600 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 SNX17Q15036 470 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 BTNL9Q6UXG8 535 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 IL25Q9H293 177 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 CYP39A1Q9NYL5 469 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 CTNNA3Q9UI47 895 aa20.76■□□□□ 0.91
NME3-205ENST00000563854 ASB14A6NK59 587 aa20.75■□□□□ 0.91
NME3-205ENST00000563854 PQBP1O60828 265 aaKnown RBP20.75■□□□□ 0.91
NME3-205ENST00000563854 ACLYP53396 1101 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms