RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TRIM58Q8NG06 486 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 CAPN11Q9UMQ6 739 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 GDAQ9Y2T3 454 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 HEXIM1O94992 359 aaKnown RBP13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 ANKRD13CQ8N6S4 541 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 PARD3BQ8TEW8 1205 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 MYH10P35580 1976 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 PLEKP08567 350 aaPredicted RBP13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 TRADDQ15628 312 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 PIK3R5Q8WYR1 880 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 PLAAQ9Y263 795 aa13.73□□□□□ -0.21
SCAMP2-204ENST00000563829 B4DLN1 442 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 AP1G2O75843 785 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 RNASE9P60153 205 aaKnown RBP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 CACNA2D3Q8IZS8 1091 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 OR2W6PQ8NHA6 318 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 GGA2Q9UJY4 613 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 ATP6V1G2O95670 118 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 WASF1Q92558 559 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 HVCN1Q96D96 273 aa13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 FOXP1Q9H334 677 aaPredicted RBP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCAMP2-204ENST00000563829 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 HMGB1P1B2RPK0 211 aaPredicted RBP13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 CLTAP09496 248 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 SLC8A3P57103 927 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 IFFO1Q0D2I5 559 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 SCARF1Q14162 830 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 APPBP2Q92624 585 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 SH3GL3Q99963 347 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 LY9Q9HBG7 655 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 NRXN3Q9Y4C0 1643 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 PTPRUQ92729 1446 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 XDHP47989 1333 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 LGALS16A8MUM7 142 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 ZNF263O14978 683 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 PRCPP42785 496 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 ZAP70P43403 619 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 PAK2Q13177 524 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 UBAC1Q9BSL1 405 aa13.71□□□□□ -0.21
SCAMP2-204ENST00000563829 PHF20L1A8MW92 1017 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 ADORA1P30542 326 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 ELF3P78545 371 aaPredicted RBP13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF174Q15697 407 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 GLE1Q53GS7 698 aaKnown RBP13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 RCSD1Q6JBY9 416 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 RUBCNQ92622 972 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 CUL5Q93034 780 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 SAAL1Q96ER3 474 aa13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 PUS3Q9BZE2 481 aaKnown RBP13.71□□□□□ -0.22
SCAMP2-204ENST00000563829 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 MGRN1O60291 552 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 TCP1P17987 556 aaKnown RBP13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 XRCC4Q13426 336 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 ARFGAP2Q8N6H7 521 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 TECPR2O15040 1411 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 ITIH3Q06033 890 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 MEA1Q16626 185 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms