RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CACNA2D2	Q9NY47	1150 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	ZBTB1	Q9Y2K1	713 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	SOS1	Q07889	1333 aa	Predicted RBP	9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	N4BP2	Q86UW6	1770 aa	Predicted RBP	9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	PF4	P02776	101 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	DRD2	P14416	443 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	TCF3	P15923	654 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	KCNA3	P22001	575 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	CANX	P27824	592 aa	Known RBP	9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	PPP2R1A	P30153	589 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	TM4SF1	P30408	202 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	CHRNA5	P30532	468 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	PRKAR2B	P31323	418 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	FAM160A1	Q05DH4	1040 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071		Q6ZS46	218 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	ARHGAP27	Q6ZUM4	889 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	UBL7	Q96S82	380 aa	Predicted RBP	9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	C4A	P0C0L4	1744 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	C10orf71	Q711Q0	1435 aa		9.38	□□□□□ -0.91
MARK3-223	ENST00000561071	KCP	Q6ZWJ8	1503 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	MRC1	P22897	1456 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	GNAT3	A8MTJ3	354 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	POLRMT	O00411	1230 aa	Known RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	KCNQ3	O43525	872 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	LMNB1	P20700	586 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	TEF	Q10587	303 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	FDX2	Q6P4F2	183 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	USP48	Q86UV5	1035 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	NT5DC4	Q86YG4	428 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	C12orf50	Q8NA57	414 aa	Predicted RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	SMG8	Q8ND04	991 aa	Known RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	ZNF496	Q96IT1	587 aa	Predicted RBP	9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	SUGCT	Q9HAC7	445 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	CYP4F12	Q9HCS2	524 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	IGSF5	Q9NSI5	407 aa		9.37	□□□□□ -0.91
MARK3-223	ENST00000561071	U2AF1L5	P0DN76	240 aa	Predicted RBP	9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	PREP	P48147	710 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	U2AF1	Q01081	240 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	CAMK2G	Q13555	558 aa	Predicted RBP	9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	PWP1	Q13610	501 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	NFIX	Q14938	502 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	KIF4B	Q2VIQ3	1234 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	TTC5	Q8N0Z6	440 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	CFAP53	Q96M91	514 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	MIR1-1HG	Q9H1L0	117 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	NARF	Q9UHQ1	456 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	PPP1R9A	Q9ULJ8	1098 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	PCDHGC5	Q9Y5F6	944 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	KIAA1551	Q9HCM1	1747 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	ADCY9	O60503	1353 aa		9.36	□□□□□ -0.91
MARK3-223	ENST00000561071	TIAF1	O95411	115 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	A1BG	P04217	495 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	ADH5	P11766	374 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	GATA4	P43694	442 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	CDK8	P49336	464 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	RACK1	P63244	317 aa	Known RBP	9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	LMNB2	Q03252	620 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	ANKRD34A	Q69YU3	496 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	ZNF790	Q6PG37	636 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	MCM10	Q7L590	875 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	TRIM42	Q8IWZ5	723 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	DZIP1L	Q8IYY4	767 aa	Known RBP	9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	JARID2	Q92833	1246 aa	Predicted RBP	9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	PIM2	Q9P1W9	311 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	PCDHA4	Q9UN74	947 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	AP4E1	Q9UPM8	1137 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	VIRMA	Q69YN4	1812 aa	Known RBP	9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	KIF13B	Q9NQT8	1826 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	ADAMTS7	Q9UKP4	1686 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	COL15A1	P39059	1388 aa		9.35	□□□□□ -0.91
MARK3-223	ENST00000561071	BTBD11	A6QL63	1104 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	STARD3NL	O95772	234 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	GART	P22102	1010 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	PIP4K2A	P48426	406 aa	Predicted RBP	9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	SOX4	Q06945	474 aa	Predicted RBP	9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	DCTN1	Q14203	1278 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	DALRD3	Q5D0E6	543 aa	Known RBP	9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	BNC2	Q6ZN30	1099 aa	Predicted RBP	9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	CEP41	Q9BYV8	373 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	ADAMTS1	Q9UHI8	967 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	NUDC	Q9Y266	331 aa		9.34	□□□□□ -0.91
MARK3-223	ENST00000561071	CEP350	Q5VT06	3117 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	PRAMEF22	A3QJZ6	481 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	TMPRSS2	O15393	492 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	SART1	O43290	800 aa	Known RBP	9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	SERPINB2	P05120	415 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	SLFN14	P0C7P3	912 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	EIF4A3	P38919	411 aa	Known RBP	9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	EIF5	P55010	431 aa	Known RBP	9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	RAD51AP2	Q09MP3	1159 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	INPP5A	Q14642	412 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	FBXL19	Q6PCT2	694 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	GOLM1	Q8NBJ4	401 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	SSBP4	Q9BWG4	385 aa	Predicted RBP	9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	DDX41	Q9UJV9	622 aa	Known RBP	9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	USP16	Q9Y5T5	823 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	CSAD	Q9Y600	493 aa		9.33	□□□□□ -0.92
MARK3-223	ENST00000561071	HEG1	Q9ULI3	1381 aa		9.33	□□□□□ -0.92

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