RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
SNRPA1-214ENST00000560987 SLC38A10Q9HBR0 1119 aa10.55□□□□□ -0.72
SNRPA1-214ENST00000560987 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 TFRCP02786 760 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 INHAP05111 366 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CCL5P13501 91 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CNGA1P29973 690 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 FGD1P98174 961 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 KRT32Q14532 448 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 MTFR1Q15390 333 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 SEC23AQ15436 765 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CCL14Q16627 93 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 MFSD14CQ5VZR4 134 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 SYNE3Q6ZMZ3 975 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CATIPQ7Z7H3 387 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 ANKRD35Q8N283 1001 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 NUP133Q8WUM0 1156 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 TRERF1Q96PN7 1200 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 ZNF214Q9UL59 606 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 RIPK3Q9Y572 518 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
SNRPA1-214ENST00000560987 KLRF2D3W0D1 207 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 HMGCRP04035 888 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 PGK2P07205 417 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 EN2P19622 333 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 OAZ1P54368 228 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 GRB14Q14449 540 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 BTNL9Q6UXG8 535 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 CHST13Q8NET6 341 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 REPS2Q8NFH8 660 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 NPLOC4Q8TAT6 608 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 IGDCC4Q8TDY8 1250 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 USP6NLQ92738 828 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 APBA2Q99767 749 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 HMX1Q9NP08 348 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 FBXO40Q9UH90 709 aa10.53□□□□□ -0.72
SNRPA1-214ENST00000560987 COL11A1P12107 1806 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 ATP2A1O14983 1001 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 COBLO75128 1261 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 SLC34A2O95436 690 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 CYP2C19P33261 490 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 ANTXR2P58335 489 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 TRIM32Q13049 653 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 TKFCQ3LXA3 575 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 DHX32Q7L7V1 743 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 ADGRF4Q8IZF3 695 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 TRIB2Q92519 343 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 GPHNQ9NQX3 736 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 RNF146Q9NTX7 359 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 RLFQ13129 1914 aa10.52□□□□□ -0.73
SNRPA1-214ENST00000560987 ZNFX1Q9P2E3 1918 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 ICAM1P05362 532 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 HMGB1P09429 215 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 SNHG28P0DPA3 235 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 PSMA5P28066 241 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 HSPA4P34932 840 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 ADCK5Q3MIX3 580 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 USH1GQ495M9 461 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 NSMFQ6X4W1 530 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 CTCFLQ8NI51 663 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 TCEANC2Q96MN5 208 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 JAKMIP1Q96N16 626 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 DEFB118Q96PH6 123 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 USP26Q9BXU7 913 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 ACAD9Q9H845 621 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 LY9Q9HBG7 655 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 FLRT1Q9NZU1 646 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 PNMA2Q9UL42 364 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 SNX14Q9Y5W7 946 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 RPTORQ8N122 1335 aa10.51□□□□□ -0.73
SNRPA1-214ENST00000560987 GJB1P08034 283 aa10.5□□□□□ -0.73
SNRPA1-214ENST00000560987 HOXC6P09630 235 aa10.5□□□□□ -0.73
SNRPA1-214ENST00000560987 CAPN2P17655 700 aa10.5□□□□□ -0.73
SNRPA1-214ENST00000560987 KIF5BP33176 963 aa10.5□□□□□ -0.73
SNRPA1-214ENST00000560987 GRM4Q14833 912 aa10.5□□□□□ -0.73
SNRPA1-214ENST00000560987 MUM1L1Q5H9M0 696 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms