RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 DHX58Q96C10 678 aa28.48■■■□□ 2.15
SHF-208ENST00000560734 GSDMAQ96QA5 445 aa28.48■■■□□ 2.15
SHF-208ENST00000560734 A0A087X0B3 334 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 PSMD14O00487 310 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 ZBTB5O15062 677 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 FOXN1O15353 648 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 ADCY7P51828 1080 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 SEMA3FQ13275 785 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 DHX8Q14562 1220 aaKnown RBP28.47■■■□□ 2.15
SHF-208ENST00000560734 ABCB5Q2M3G0 1257 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 FAM151AQ8WW52 585 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 GPCPD1Q9NPB8 672 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 RIC8AQ9NPQ8 531 aa28.47■■■□□ 2.15
SHF-208ENST00000560734 DLGAP5Q15398 846 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 CLEC10AQ8IUN9 316 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 DRC7Q8IY82 874 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 NIM1KQ8IY84 436 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 CCSER1Q9C0I3 900 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 R3HDM1Q15032 1099 aaKnown RBP28.46■■■□□ 2.15
SHF-208ENST00000560734 SPC24Q8NBT2 197 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 GMCL1Q96IK5 515 aa28.46■■■□□ 2.15
SHF-208ENST00000560734 ZNF277Q9NRM2 450 aaPredicted RBP28.46■■■□□ 2.15
SHF-208ENST00000560734 NEMFO60524 1076 aa28.45■■■□□ 2.14
SHF-208ENST00000560734 BMP6P22004 513 aa28.45■■■□□ 2.14
SHF-208ENST00000560734 ERCC5P28715 1186 aaPredicted RBP28.45■■■□□ 2.14
SHF-208ENST00000560734 ICA1Q05084 483 aa28.45■■■□□ 2.14
SHF-208ENST00000560734 CCDC96Q2M329 555 aa28.45■■■□□ 2.14
SHF-208ENST00000560734 SPDYE2Q495Y8 402 aa28.45■■■□□ 2.14
SHF-208ENST00000560734 PRR29P0C7W0 189 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 POLD1P28340 1107 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 DPYDQ12882 1025 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 RBM26Q5T8P6 1007 aaKnown RBP28.44■■■□□ 2.14
SHF-208ENST00000560734 SLFN13Q68D06 897 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 PDXDC2PQ6P474 469 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 SIAH1Q8IUQ4 282 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 CSRNP1Q96S65 589 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 TTC12Q9H892 705 aaPredicted RBP28.44■■■□□ 2.14
SHF-208ENST00000560734 IMPACTQ9P2X3 320 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 ZNF70Q9UC06 446 aaPredicted RBP28.44■■■□□ 2.14
SHF-208ENST00000560734 COL4A5P29400 1685 aa28.44■■■□□ 2.14
SHF-208ENST00000560734 MYL1P05976 194 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 MRPL12P52815 198 aaKnown RBP28.43■■■□□ 2.14
SHF-208ENST00000560734 ENOX1Q8TC92 643 aaKnown RBP28.43■■■□□ 2.14
SHF-208ENST00000560734 MTFR1LQ9H019 292 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 RAD17O75943 681 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 SLC1A4P43007 532 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 ATP2B2Q01814 1243 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 SEPT2Q15019 361 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 CCDC186Q7Z3E2 898 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 FAM83AQ86UY5 434 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 TEX2Q8IWB9 1127 aa28.43■■■□□ 2.14
SHF-208ENST00000560734 TBC1D12O60347 775 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 OR52Z1P0C646 297 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 DALRD3Q5D0E6 543 aaKnown RBP28.42■■■□□ 2.14
SHF-208ENST00000560734 MCTP2Q6DN12 878 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 TMEM60Q9H2L4 133 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 CUEDC2Q9H467 287 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 MAGEF1Q9HAY2 307 aa28.42■■■□□ 2.14
SHF-208ENST00000560734 GTPBP6O43824 516 aaPredicted RBP28.41■■■□□ 2.14
SHF-208ENST00000560734 CLK2P49760 499 aaKnown RBP28.41■■■□□ 2.14
SHF-208ENST00000560734 TBCKQ8TEA7 893 aa28.41■■■□□ 2.14
SHF-208ENST00000560734 CUL5Q93034 780 aa28.41■■■□□ 2.14
SHF-208ENST00000560734 ZBED3Q96IU2 234 aaPredicted RBP28.41■■■□□ 2.14
SHF-208ENST00000560734 HSD3B7Q9H2F3 369 aa28.41■■■□□ 2.14
SHF-208ENST00000560734 KCNF1Q9H3M0 494 aa28.41■■■□□ 2.14
SHF-208ENST00000560734 ISM2Q6H9L7 571 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 TTBK2Q6IQ55 1244 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 COA7Q96BR5 231 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 NAP1L4Q99733 375 aaKnown RBP28.4■■■□□ 2.14
SHF-208ENST00000560734 CBFA2T2O43439 604 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 KCTD1Q719H9 257 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 DISC1Q9NRI5 854 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 SPTLC3Q9NUV7 552 aa28.4■■■□□ 2.14
SHF-208ENST00000560734 BIN2Q9UBW5 565 aaPredicted RBP28.4■■■□□ 2.14
SHF-208ENST00000560734 FAM196BA6NMK8 535 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 USP17L10C9JJH3 530 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 CCNT1O60563 726 aaKnown RBP28.39■■■□□ 2.14
SHF-208ENST00000560734 PTGS1P23219 599 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 GSDMDP57764 484 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 LETM2Q2VYF4 491 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 BTNL9Q6UXG8 535 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 GRAMD1CQ8IYS0 662 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 KIAA1524Q8TCG1 905 aa28.39■■■□□ 2.14
SHF-208ENST00000560734 ZNF830Q96NB3 372 aaPredicted RBP28.39■■■□□ 2.14
SHF-208ENST00000560734 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.13
SHF-208ENST00000560734 F5H6K3 240 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 PPP1R11O60927 126 aaPredicted RBP28.38■■■□□ 2.13
SHF-208ENST00000560734 UBA7P41226 1012 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 KLRC3Q07444 240 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.38■■■□□ 2.13
SHF-208ENST00000560734 RMND1Q9NWS8 449 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 FER1L6Q2WGJ9 1857 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 JAKMIP3Q5VZ66 844 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 PPP4R3AQ6IN85 833 aa28.38■■■□□ 2.13
SHF-208ENST00000560734 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
SHF-208ENST00000560734 SLURP2P0DP57 97 aa28.37■■■□□ 2.13
SHF-208ENST00000560734 AFMP43652 599 aa28.37■■■□□ 2.13
SHF-208ENST00000560734 FANCCQ00597 558 aa28.37■■■□□ 2.13
SHF-208ENST00000560734 TAOK3Q9H2K8 898 aa28.37■■■□□ 2.13
SHF-208ENST00000560734 BRCA1P38398 1863 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms