RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
PSME1-207ENST00000560420 ZNF467Q7Z7K2 595 aaPredicted RBP17.25■□□□□ 0.35
PSME1-207ENST00000560420 FBXO40Q9UH90 709 aa17.25■□□□□ 0.35
PSME1-207ENST00000560420 DDX20Q9UHI6 824 aaKnown RBP17.25■□□□□ 0.35
PSME1-207ENST00000560420 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
PSME1-207ENST00000560420 MSCO60682 206 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 ICAM1P05362 532 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 SLC16A2P36021 539 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 SNAP25P60880 206 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
PSME1-207ENST00000560420 FAM133AQ8N9E0 248 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
PSME1-207ENST00000560420 TINF2Q9BSI4 451 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
PSME1-207ENST00000560420 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
PSME1-207ENST00000560420 ASTN1O14525 1302 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 PFASO15067 1338 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 RANBP2P49792 3224 aaKnown RBP17.23■□□□□ 0.35
PSME1-207ENST00000560420 SEPT4O43236 478 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
PSME1-207ENST00000560420 GPATCH4Q5T3I0 446 aaKnown RBP17.23■□□□□ 0.35
PSME1-207ENST00000560420 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 GPCPD1Q9NPB8 672 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 A1CFQ9NQ94 594 aaKnown RBP17.23■□□□□ 0.35
PSME1-207ENST00000560420 RNF146Q9NTX7 359 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
PSME1-207ENST00000560420 WDR19Q8NEZ3 1342 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 E7EWF7 191 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 SNAI1O95863 264 aaPredicted RBP17.22■□□□□ 0.35
PSME1-207ENST00000560420 ZNF865P0CJ78 1059 aaPredicted RBP17.22■□□□□ 0.35
PSME1-207ENST00000560420 ANTXR2P58335 489 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 IKQ13123 557 aaPredicted RBP17.22■□□□□ 0.35
PSME1-207ENST00000560420 COL9A3Q14050 684 aaPredicted RBP17.22■□□□□ 0.35
PSME1-207ENST00000560420 MUM1L1Q5H9M0 696 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 PRAMEF19Q5SWL8 479 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
PSME1-207ENST00000560420 MB21D2Q8IYB1 491 aaPredicted RBP17.22■□□□□ 0.35
PSME1-207ENST00000560420 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
PSME1-207ENST00000560420 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
PSME1-207ENST00000560420 HTATIP2Q9BUP3 242 aa17.21■□□□□ 0.35
PSME1-207ENST00000560420 KATNBL1Q9H079 304 aa17.21■□□□□ 0.35
PSME1-207ENST00000560420 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
PSME1-207ENST00000560420 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
PSME1-207ENST00000560420 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 ASPRV1Q53RT3 343 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 CCDC174Q6PII3 467 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 UBAC1Q9BSL1 405 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 CCPG1Q9ULG6 757 aa17.2■□□□□ 0.34
PSME1-207ENST00000560420 ISY1Q9ULR0 285 aaKnown RBP17.2■□□□□ 0.34
PSME1-207ENST00000560420 MCM3APO60318 1980 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 CEP290O15078 2479 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 SOWAHBA6NEL2 793 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 SLC27A2O14975 620 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 ALAS1P13196 640 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 IFIT1BQ5T764 474 aaKnown RBP17.19■□□□□ 0.34
PSME1-207ENST00000560420 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 IGDCC4Q8TDY8 1250 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
PSME1-207ENST00000560420 DNM1LO00429 736 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 NFIBO00712 420 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
PSME1-207ENST00000560420 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
PSME1-207ENST00000560420 H0YGN5 161 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 CNGA1P29973 690 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 TROAPQ12815 778 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 TRDNQ13061 729 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 CREB3L3Q68CJ9 461 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 ARMCX2Q7L311 632 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 STAG2Q8N3U4 1231 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 MTA3Q9BTC8 594 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 PRO3102Q9H379 93 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.17■□□□□ 0.34
PSME1-207ENST00000560420 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 PNMA2Q9UL42 364 aa17.17■□□□□ 0.34
PSME1-207ENST00000560420 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
PSME1-207ENST00000560420 ADCY6O43306 1168 aa17.16■□□□□ 0.34
PSME1-207ENST00000560420 CDC45O75419 566 aa17.16■□□□□ 0.34
PSME1-207ENST00000560420 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
PSME1-207ENST00000560420 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
PSME1-207ENST00000560420 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
PSME1-207ENST00000560420 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
PSME1-207ENST00000560420 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms