RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 DNM3Q9UQ16 869 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 ELP1O95163 1332 aa11.93□□□□□ -0.5
CARMIL3-202ENST00000559694 DKC1O60832 514 aaKnown RBP eCLIP11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 TECP42680 631 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 MCTP2Q6DN12 878 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 CLEC10AQ8IUN9 316 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 TMEM87AQ8NBN3 555 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 KIF5CO60282 957 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 NR5A1Q13285 461 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 FERMT2Q96AC1 680 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 ZNF609O15014 1411 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 DYMQ7RTS9 669 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 CABP7Q86V35 215 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM114A1Q8IWE2 563 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
CARMIL3-202ENST00000559694 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 NT5C2P49902 561 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 MIER3Q7Z3K6 550 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 MB21D2Q8IYB1 491 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 PHACTR2O75167 634 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 YEATS4O95619 227 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HARSP12081 509 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 CDR1P51861 262 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HMGCS2P54868 508 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 NFIAQ12857 509 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 PTGDRQ13258 359 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 DHX37Q8IY37 1157 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 GPATCH11Q8N954 259 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 SLIT2O94813 1529 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 KRT13P13646 458 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HDLBPQ00341 1268 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 MCM6Q14566 821 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 UTP14CQ5TAP6 766 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
CARMIL3-202ENST00000559694 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 ORC4O43929 436 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 ZNF202O95125 648 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 TDRD12Q587J7 1177 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 PNMA6FA0A0J9YX94 578 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 TOB2Q14106 344 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 ELF2Q15723 593 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 RCSD1Q6JBY9 416 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 PAF1Q8N7H5 531 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 ADD3Q9UEY8 706 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 OR52Z1P0C646 297 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 UBE2SQ16763 222 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 C10orf67Q8IYJ2 551 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.5
CARMIL3-202ENST00000559694 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 POTEJP0CG39 1038 aa11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 CYP4A11Q02928 519 aa11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 EPB41L4AQ9HCS5 686 aaPredicted RBP11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 PRM3Q9NNZ6 103 aa11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.51
CARMIL3-202ENST00000559694 EIF2AK2P19525 551 aaKnown RBP11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 SMTNP53814 917 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 PPP4CP60510 307 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 ARHGEF6Q15052 776 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 SEPT14Q6ZU15 432 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 USP37Q86T82 979 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 PROM2Q8N271 834 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 DCAF4Q8WV16 495 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
CARMIL3-202ENST00000559694 CENPHQ9H3R5 247 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms