RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 C12orf60Q5U649 245 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 TMEM199Q8N511 208 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 HERVK_113Q902F9 699 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 APPBP2Q92624 585 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 CCDC17Q96LX7 622 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 FGD4Q96M96 766 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 UPF3AQ9H1J1 476 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 YBX2Q9Y2T7 364 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 PTPRSQ13332 1948 aa13.4□□□□□ -0.26
CHRNA3-205ENST00000559080 RNF113AO15541 343 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 CD4P01730 458 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 BMP1P13497 986 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 COPB2P35606 906 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 GJA9P57773 515 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 PCSK9Q8NBP7 692 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 NECAB3Q96P71 396 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 NKX2-4Q9H2Z4 354 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 ZHX1Q9UKY1 873 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 BRWD1Q9NSI6 2320 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
CHRNA3-205ENST00000559080 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 USP17L21D6R901 530 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 IGFBP4P22692 258 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 CYP2C18P33260 490 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 NKX3-2P78367 333 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 RAB30Q15771 203 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 PI4K2BQ8TCG2 481 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
CHRNA3-205ENST00000559080 GPAA1O43292 621 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 GNAT2P19087 354 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 DDX11Q96FC9 970 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 STRBPQ96SI9 672 aaKnown RBP13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 NUP88Q99567 741 aaPredicted RBP13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 ABHD16BQ9H3Z7 469 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 SLC28A3Q9HAS3 691 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
CHRNA3-205ENST00000559080 TRANK1O15050 2925 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 ATP2A1O14983 1001 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 FGBP02675 491 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 TDO2P48775 406 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 TFF2Q03403 129 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 ASTN1O14525 1302 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 TANC1Q9C0D5 1861 aa13.36□□□□□ -0.27
CHRNA3-205ENST00000559080 M0R2C6 588 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 TLR3O15455 904 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 APPP05067 770 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 RABGGTBP53611 331 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 BEX3Q00994 111 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 ARMCX2Q7L311 632 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 OTOP2Q7RTS6 562 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 XIRP2A4UGR9 3374 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 GRIN2DO15399 1336 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 SALL3Q9BXA9 1300 aa13.35□□□□□ -0.27
CHRNA3-205ENST00000559080 COL4A4P53420 1690 aaPredicted RBP13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 GSG1L2A8MUP6 293 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 MINDY4BA8MYZ0 360 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 RAD21O60216 631 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 MYOGP15173 224 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 KCNQ1P51787 676 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 SBK1Q52WX2 424 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 CCDC144CPQ8IYA2 1237 aa13.34□□□□□ -0.27
CHRNA3-205ENST00000559080 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms