RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ACAD9Q9H845 621 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 KAT14Q9H8E8 782 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 CCPG1Q9ULG6 757 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 ZNF536O15090 1300 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 TNKSO95271 1327 aa17.97■□□□□ 0.47
RPL28-207ENST00000558815 MSCO60682 206 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 IGHA2P01877 340 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 NEFLP07196 543 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 GOLGA8HP0CJ92 632 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 MNX1P50219 401 aaPredicted RBP17.96■□□□□ 0.47
RPL28-207ENST00000558815 TRDNQ13061 729 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 TRERF1Q96PN7 1200 aa17.96■□□□□ 0.47
RPL28-207ENST00000558815 DIS3Q9Y2L1 958 aaKnown RBP17.96■□□□□ 0.47
RPL28-207ENST00000558815 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
RPL28-207ENST00000558815 EVI5O60447 810 aa17.95■□□□□ 0.46
RPL28-207ENST00000558815 CYP21A2P08686 494 aa17.95■□□□□ 0.46
RPL28-207ENST00000558815 ZNF543Q08ER8 600 aa17.95■□□□□ 0.46
RPL28-207ENST00000558815 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
RPL28-207ENST00000558815 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
RPL28-207ENST00000558815 MCM3APO60318 1980 aa17.95■□□□□ 0.46
RPL28-207ENST00000558815 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 DNAJC25-GNG10A0A024R161 153 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 SEPT4O43236 478 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 NT5C2P49902 561 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 BTNL9Q6UXG8 535 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
RPL28-207ENST00000558815 RANBP17Q9H2T7 1088 aaKnown RBP17.94■□□□□ 0.46
RPL28-207ENST00000558815 CPVLQ9H3G5 476 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 A1CFQ9NQ94 594 aaKnown RBP17.94■□□□□ 0.46
RPL28-207ENST00000558815 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 TAF6LQ9Y6J9 622 aa17.94■□□□□ 0.46
RPL28-207ENST00000558815 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 ICAM1P05362 532 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 TKFCQ3LXA3 575 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 GJC2Q5T442 439 aaPredicted RBP17.93■□□□□ 0.46
RPL28-207ENST00000558815 IFIT1BQ5T764 474 aaKnown RBP17.93■□□□□ 0.46
RPL28-207ENST00000558815 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 C7orf61Q8IZ16 206 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 UBA5Q9GZZ9 404 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 ZHX1Q9UKY1 873 aaPredicted RBP17.93■□□□□ 0.46
RPL28-207ENST00000558815 RBM8AQ9Y5S9 174 aaKnown RBP17.93■□□□□ 0.46
RPL28-207ENST00000558815 NR2E3Q9Y5X4 410 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 PFASO15067 1338 aa17.93■□□□□ 0.46
RPL28-207ENST00000558815 E7EWF7 191 aa17.92■□□□□ 0.46
RPL28-207ENST00000558815 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
RPL28-207ENST00000558815 CNTN2Q02246 1040 aa17.92■□□□□ 0.46
RPL28-207ENST00000558815 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
RPL28-207ENST00000558815 ESYT1Q9BSJ8 1104 aa17.92■□□□□ 0.46
RPL28-207ENST00000558815 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
RPL28-207ENST00000558815 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.91■□□□□ 0.46
RPL28-207ENST00000558815 CHST3Q7LGC8 479 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 NCOA7Q8NI08 942 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 LENG1Q96BZ8 264 aaPredicted RBP17.91■□□□□ 0.46
RPL28-207ENST00000558815 FGD4Q96M96 766 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 SENP6Q9GZR1 1112 aaPredicted RBP17.91■□□□□ 0.46
RPL28-207ENST00000558815 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 MYH6P13533 1939 aa17.91■□□□□ 0.46
RPL28-207ENST00000558815 KBTBD13C9JR72 458 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 DNM1LO00429 736 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 SNAI1O95863 264 aaPredicted RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 PARP1P09874 1014 aaKnown RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 RARBP10826 455 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 AKR1A1P14550 325 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 USH1GQ495M9 461 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 ASPRV1Q53RT3 343 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 STOX1Q6ZVD7 989 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 ARRDC4Q8NCT1 418 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 XPNPEP3Q9NQH7 507 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.9■□□□□ 0.46
RPL28-207ENST00000558815 NRBP1Q9UHY1 535 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 SYNGAP1Q96PV0 1343 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 LCTP09848 1927 aa17.9■□□□□ 0.46
RPL28-207ENST00000558815 ERICH2A1L162 156 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 NFIBO00712 420 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 COL6A1P12109 1028 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
RPL28-207ENST00000558815 SEC23AQ15436 765 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 MAMDC4Q6UXC1 1216 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 MSL3Q8N5Y2 521 aaKnown RBP17.89■□□□□ 0.45
RPL28-207ENST00000558815 FAM133AQ8N9E0 248 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 PURBQ96QR8 312 aaKnown RBP17.89■□□□□ 0.45
RPL28-207ENST00000558815 LSG1Q9H089 658 aaKnown RBP17.89■□□□□ 0.45
RPL28-207ENST00000558815 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
RPL28-207ENST00000558815 ZMYND8Q9ULU4 1186 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms