RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GNA11P29992 359 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 DSG3P32926 999 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 GJA5P36382 358 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 OAZ1P54368 228 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 DAGLBQ8NCG7 672 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 KIFC2Q96AC6 838 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 ZMYND12Q9H0C1 365 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 VPS54Q9P1Q0 977 aa17.13■□□□□ 0.33
VPS18-202ENST00000558474 ZBED4O75132 1171 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS18-202ENST00000558474 NAPAP54920 295 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 NLRP5P59047 1200 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 RGMBQ6NW40 437 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 LBX2Q6XYB7 198 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 MAF1Q9H063 256 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 C6orf50Q9HD87 102 aa17.12■□□□□ 0.33
VPS18-202ENST00000558474 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 A0A0G2JMZ2 1700 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 ICAM1P05362 532 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 KRT2P35908 639 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
VPS18-202ENST00000558474 MOGSQ13724 837 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 MCTP2Q6DN12 878 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 GADL1Q6ZQY3 521 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 SAMD3Q8N6K7 520 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 MB21D1Q8N884 522 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 GTF3C2Q8WUA4 911 aaPredicted RBP17.11■□□□□ 0.33
VPS18-202ENST00000558474 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
VPS18-202ENST00000558474 TESPA1A2RU30 521 aaPredicted RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 VWA5AO00534 786 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 OSBPP22059 807 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 INHBEP58166 350 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 RESTQ13127 1097 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 DGKZQ13574 1117 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 DIS3L2Q8IYB7 885 aaKnown RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
VPS18-202ENST00000558474 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
VPS18-202ENST00000558474 ABCB11O95342 1321 aa17.1■□□□□ 0.33
VPS18-202ENST00000558474 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 MANSC4A6NHS7 340 aaPredicted RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 SLC10A3P09131 477 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 NPY5RQ15761 445 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 OTUD7BQ6GQQ9 843 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 ANKRD23Q86SG2 305 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 SHISA4Q96DD7 197 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
VPS18-202ENST00000558474 MRPL11Q9Y3B7 192 aaKnown RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
VPS18-202ENST00000558474 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
VPS18-202ENST00000558474 FOSBP53539 338 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 IRX3P78415 501 aaPredicted RBP17.08■□□□□ 0.32
VPS18-202ENST00000558474 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 CUL5Q93034 780 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 COA7Q96BR5 231 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
VPS18-202ENST00000558474 MAP3K20Q9NYL2 800 aaKnown RBP17.08■□□□□ 0.32
VPS18-202ENST00000558474 ZNF536O15090 1300 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 CCL15-CCL14A0A0B4J2E2 113 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 M0R2N6 131 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 ADCY7P51828 1080 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 CCL15Q16663 113 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
VPS18-202ENST00000558474 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
VPS18-202ENST00000558474 RBBP6Q7Z6E9 1792 aaKnown RBP17.07■□□□□ 0.32
VPS18-202ENST00000558474 PIK3CDO00329 1044 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 COPB2P35606 906 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms