RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 HOMER2Q9NSB8 354 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 DDAH1O94760 285 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 FCER1AP12319 257 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 CPA1P15085 419 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 ELNP15502 786 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 ADORA2AP29274 412 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 LIFRP42702 1097 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 FGD1P98174 961 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 TROAPQ12815 778 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 MORN1Q5T089 497 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 STAG2Q8N3U4 1231 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 MMP19Q99542 508 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 APBA2Q99767 749 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 UBA5Q9GZZ9 404 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 CCPG1Q9ULG6 757 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
HNRNPC-232ENST00000557442 ZNF536O15090 1300 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 CCDC85CA6NKD9 419 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 STRNO43815 780 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 ICAM1P05362 532 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 ALAS1P13196 640 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 PSMA5P28066 241 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 KCTD2Q14681 263 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
HNRNPC-232ENST00000557442 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 HMGCRP04035 888 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 INHAP05111 366 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 RXRAP19793 462 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 RPS6KB1P23443 525 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 KIF5BP33176 963 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 DPP9Q86TI2 863 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 SGMS1Q86VZ5 419 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 ADGRF4Q8IZF3 695 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 TRIB2Q92519 343 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 USP6NLQ92738 828 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 ACAD9Q9H845 621 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
HNRNPC-232ENST00000557442 SEC24BO95487 1268 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 CALM1P0DP23 149 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 CALM2P0DP24 149 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 CALM3P0DP25 149 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 UBXN2AP68543 259 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 CCL14Q16627 93 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 USH1GQ495M9 461 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 SYNE3Q6ZMZ3 975 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 Q6ZUG5 572 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 SLC5A4Q9NY91 659 aa12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-232ENST00000557442 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 COBLO75128 1261 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 PGK2P07205 417 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 HOXC6P09630 235 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 HOMER1Q86YM7 354 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 NPLOC4Q8TAT6 608 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 BRF1Q92994 677 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms