RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SPAG1Q07617 926 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 DPYDQ12882 1025 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 DISP2A7MBM2 1401 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 SLC1A4P43007 532 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 FAM193AP78312 1265 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 FCER1AP12319 257 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 GTF2F1P35269 517 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 TNNT3P45378 269 aaPredicted RBP17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 ADCY7P51828 1080 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 AMPD3Q01432 767 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 GDAP1L1Q96MZ0 367 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 ATRNO75882 1429 aa17.2■□□□□ 0.34
TMEM55B-207ENST00000557041 FLT1P17948 1338 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 TDP2O95551 362 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 RAB34Q9BZG1 259 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 N4BP2Q86UW6 1770 aaPredicted RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 PHACTR2O75167 634 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 GYS1P13807 737 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 TCERG1LQ5VWI1 586 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 PYM1Q9BRP8 204 aaKnown RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 BARHL2Q9NY43 387 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 SCAF8Q9UPN6 1271 aaKnown RBP17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
TMEM55B-207ENST00000557041 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 MMP10P09238 476 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 TM4SF1P30408 202 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 GRM4Q14833 912 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 IL17AQ16552 155 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 CCDC122Q5T0U0 273 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L6PQ6QN14 398 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 CTAGE9A4FU28 777 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 GOLGA6L9A6NEM1 432 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 MYO1BO43795 1136 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 TRAPPC10P48553 1259 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 DAGLAQ9Y4D2 1042 aa17.18■□□□□ 0.34
TMEM55B-207ENST00000557041 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 AKR1B10O60218 316 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 RCAN1P53805 252 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 CYP27A1Q02318 531 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 SYCP1Q15431 976 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 SBK1Q52WX2 424 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 ZNF658Q5TYW1 1059 aaPredicted RBP17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 RAD9BQ6WBX8 426 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 SLC35F6Q8N357 371 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 CHP1Q99653 195 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 TRAF5O00463 557 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 BBOX1O75936 387 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 NLRC4Q9NPP4 1024 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 MED15Q96RN5 788 aa17.17■□□□□ 0.34
TMEM55B-207ENST00000557041 CHMP2AO43633 222 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 NR1I3Q14994 352 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 SPA17Q15506 151 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TCP11X2Q5H9J9 407 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TEKT1Q969V4 418 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 OGFRQ9NZT2 677 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 CTIFO43310 598 aaKnown RBP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TAL1P17542 331 aaPredicted RBP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TRIM10Q9UDY6 481 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 MYH2Q9UKX2 1941 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 STXBP3O00186 592 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms