RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 RAD9AQ99638 391 aa15.16■□□□□ 0.02
ABCD4-226ENST00000556971 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
ABCD4-226ENST00000556971 MCM3APO60318 1980 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 GJB5O95377 273 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 ICAM3P32942 547 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 PSMC6P62333 389 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
ABCD4-226ENST00000556971 SPEGQ15772 3267 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 DCDC2BA2VCK2 349 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 NCK2O43639 380 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 SNAI1O95863 264 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-226ENST00000556971 GH2P01242 217 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 USP14P54578 494 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
ABCD4-226ENST00000556971 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-226ENST00000556971 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 ALDH8A1Q9H2A2 487 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-226ENST00000556971 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
ABCD4-226ENST00000556971 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
ABCD4-226ENST00000556971 CYSRT1A8MQ03 144 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 FGFR2P21802 821 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 HYAL1Q12794 435 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 GPM6BQ13491 265 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
ABCD4-226ENST00000556971 ZBTB33Q86T24 672 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 ACER1Q8TDN7 264 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 DNAAF4Q8WXU2 420 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
ABCD4-226ENST00000556971 LINC01565O15544 149 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 CABYRO75952 493 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
ABCD4-226ENST00000556971 ANGPT1Q15389 498 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 RUBCNQ92622 972 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
ABCD4-226ENST00000556971 HAUS7Q99871 368 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 SIL1Q9H173 461 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 R4GN57 208 aa15.12■□□□□ 0.01
ABCD4-226ENST00000556971 FRYQ5TBA9 3013 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 COG2Q14746 738 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 CRIPAKQ8N1N5 446 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 SEMA4AQ9H3S1 761 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 ZZEF1O43149 2961 aa15.11■□□□□ 0.01
ABCD4-226ENST00000556971 ACVR2BQ13705 512 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 IGFLR1Q9H665 355 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 HOXC10Q9NYD6 342 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 ABCF2Q9UG63 623 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
ABCD4-226ENST00000556971 ASTN1O14525 1302 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 CEP295Q9C0D2 2601 aa15.1■□□□□ 0.01
ABCD4-226ENST00000556971 H3BNC9 293 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 RBAK-RBAKDNI3L0D1 243 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 CSPG5O95196 566 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 SDHBP21912 280 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 NDUFV1P49821 464 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 RAB3GAP1Q15042 981 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 MB21D1Q8N884 522 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABCD4-226ENST00000556971 ATG4CQ96DT6 458 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 NLRC5Q86WI3 1866 aa15.09■□□□□ 0.01
ABCD4-226ENST00000556971 EYA4O95677 639 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 SUPT20HL2P0C7V6 817 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 PTGS1P23219 599 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
ABCD4-226ENST00000556971 TEX11Q8IYF3 940 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 ZGPATQ8N5A5 531 aaKnown RBP15.08■□□□□ 0
ABCD4-226ENST00000556971 TSPYL6Q8N831 410 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 RETREG2Q8NC44 543 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 MSLNLQ96KJ4 702 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 PHF7Q9BWX1 381 aaPredicted RBP15.08■□□□□ 0
ABCD4-226ENST00000556971 SEZ6LQ9BYH1 1024 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
ABCD4-226ENST00000556971 ZNF853P0CG23 659 aa15.07■□□□□ 0
ABCD4-226ENST00000556971 NKX3-2P78367 333 aa15.07■□□□□ 0
ABCD4-226ENST00000556971 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 FLIIQ13045 1269 aa15.07■□□□□ 0
ABCD4-226ENST00000556971 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 NOL8Q76FK4 1167 aaKnown RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 MSL3Q8N5Y2 521 aaKnown RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 SMRP1Q8NCR6 262 aa15.07■□□□□ 0
ABCD4-226ENST00000556971 ZNF384Q8TF68 577 aa15.07■□□□□ 0
ABCD4-226ENST00000556971 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 USP15Q9Y4E8 981 aaPredicted RBP15.07■□□□□ 0
ABCD4-226ENST00000556971 HELZ2Q9BYK8 2649 aaKnown RBP15.06■□□□□ 0
ABCD4-226ENST00000556971 TRIP12Q14669 1992 aaPredicted RBP15.06■□□□□ 0
ABCD4-226ENST00000556971 GRM8O00222 908 aa15.06■□□□□ 0
ABCD4-226ENST00000556971 SLC25A27O95847 323 aa15.06■□□□□ 0
ABCD4-226ENST00000556971 ARP10275 920 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms