RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ASPRV1Q53RT3 343 aa26.76■■□□□ 1.87
TDP1-216ENST00000556867 MFSD14CQ5VZR4 134 aa26.76■■□□□ 1.87
TDP1-216ENST00000556867 AGBL1Q96MI9 1066 aa26.76■■□□□ 1.87
TDP1-216ENST00000556867 HMX1Q9NP08 348 aaPredicted RBP26.76■■□□□ 1.87
TDP1-216ENST00000556867 SLC4A3P48751 1232 aa26.75■■□□□ 1.87
TDP1-216ENST00000556867 SNAP25P60880 206 aa26.75■■□□□ 1.87
TDP1-216ENST00000556867 CACNB2Q08289 660 aaPredicted RBP26.75■■□□□ 1.87
TDP1-216ENST00000556867 CCDC174Q6PII3 467 aa26.75■■□□□ 1.87
TDP1-216ENST00000556867 SHISA4Q96DD7 197 aa26.75■■□□□ 1.87
TDP1-216ENST00000556867 MTA3Q9BTC8 594 aa26.75■■□□□ 1.87
TDP1-216ENST00000556867 SMCHD1A6NHR9 2005 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 ICAM1P05362 532 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 GOLGA8HP0CJ92 632 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 WTAPQ15007 396 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 ZNF792Q3KQV3 632 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 CHST3Q7LGC8 479 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 U2AF1L4Q8WU68 220 aaKnown RBP26.74■■□□□ 1.87
TDP1-216ENST00000556867 MAML3Q96JK9 1138 aa26.74■■□□□ 1.87
TDP1-216ENST00000556867 DIS3Q9Y2L1 958 aaKnown RBP26.74■■□□□ 1.87
TDP1-216ENST00000556867 PGK2P07205 417 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 PARP1P09874 1014 aaKnown RBP26.73■■□□□ 1.87
TDP1-216ENST00000556867 CAPN2P17655 700 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 TMEM67Q5HYA8 995 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 IGDCC4Q8TDY8 1250 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 DEFB118Q96PH6 123 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 ACAD9Q9H845 621 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 HOMER2Q9NSB8 354 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 RNF146Q9NTX7 359 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 CCPG1Q9ULG6 757 aa26.73■■□□□ 1.87
TDP1-216ENST00000556867 DNAJC25-GNG10A0A024R161 153 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 SGPL1O95470 568 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 MCM5P33992 734 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 TSGA10IPQ3SY00 556 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 SENP2Q9HC62 589 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 PNMA2Q9UL42 364 aa26.72■■□□□ 1.87
TDP1-216ENST00000556867 MKI67P46013 3256 aaKnown RBP26.71■■□□□ 1.87
TDP1-216ENST00000556867 PRC1O43663 620 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 REC8O95072 547 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 ALAS1P13196 640 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 CYP2C19P33261 490 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 DDX11Q96FC9 970 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 TRERF1Q96PN7 1200 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 UBA5Q9GZZ9 404 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 CRISPLD2Q9H0B8 497 aa26.71■■□□□ 1.87
TDP1-216ENST00000556867 WDR19Q8NEZ3 1342 aa26.7■■□□□ 1.87
TDP1-216ENST00000556867 COL9A3Q14050 684 aaPredicted RBP26.7■■□□□ 1.86
TDP1-216ENST00000556867 ANKRD35Q8N283 1001 aa26.7■■□□□ 1.86
TDP1-216ENST00000556867 TMEM87BQ96K49 555 aa26.7■■□□□ 1.86
TDP1-216ENST00000556867 CPVLQ9H3G5 476 aa26.7■■□□□ 1.86
TDP1-216ENST00000556867 LY9Q9HBG7 655 aa26.7■■□□□ 1.86
TDP1-216ENST00000556867 PDE4DIPQ5VU43 2346 aa26.7■■□□□ 1.86
TDP1-216ENST00000556867 CCND3P30281 292 aaPredicted RBP26.69■■□□□ 1.86
TDP1-216ENST00000556867 RASEFQ8IZ41 740 aa26.69■■□□□ 1.86
TDP1-216ENST00000556867 A1CFQ9NQ94 594 aaKnown RBP26.69■■□□□ 1.86
TDP1-216ENST00000556867 TNRC18O15417 2968 aaPredicted RBP26.69■■□□□ 1.86
TDP1-216ENST00000556867 FRMPD3Q5JV73 1810 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 SH2B2O14492 632 aaPredicted RBP26.68■■□□□ 1.86
TDP1-216ENST00000556867 CYBAP13498 195 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 TROAPQ12815 778 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 GRM4Q14833 912 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 ADGRF4Q8IZF3 695 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 KCNB2Q92953 911 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 MAD2L2Q9UI95 211 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 MYH6P13533 1939 aa26.68■■□□□ 1.86
TDP1-216ENST00000556867 PFASO15067 1338 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 PALM3A6NDB9 673 aaPredicted RBP26.67■■□□□ 1.86
TDP1-216ENST00000556867 TAL1P17542 331 aaPredicted RBP26.67■■□□□ 1.86
TDP1-216ENST00000556867 KRT32Q14532 448 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 MUM1L1Q5H9M0 696 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 CATIPQ7Z7H3 387 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 ZNF467Q7Z7K2 595 aaPredicted RBP26.67■■□□□ 1.86
TDP1-216ENST00000556867 STAG2Q8N3U4 1231 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 MSL3Q8N5Y2 521 aaKnown RBP26.67■■□□□ 1.86
TDP1-216ENST00000556867 NEK1Q96PY6 1258 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 TINF2Q9BSI4 451 aa26.67■■□□□ 1.86
TDP1-216ENST00000556867 GPHNQ9NQX3 736 aaPredicted RBP26.67■■□□□ 1.86
TDP1-216ENST00000556867 KLRF2D3W0D1 207 aa26.66■■□□□ 1.86
TDP1-216ENST00000556867 EPB41L2O43491 1005 aaKnown RBP26.66■■□□□ 1.86
TDP1-216ENST00000556867 HSPA4P34932 840 aa26.66■■□□□ 1.86
TDP1-216ENST00000556867 CDC37Q16543 378 aaPredicted RBP26.66■■□□□ 1.86
TDP1-216ENST00000556867 TMTC2Q8N394 836 aa26.66■■□□□ 1.86
TDP1-216ENST00000556867 TRPV1Q8NER1 839 aa26.66■■□□□ 1.86
TDP1-216ENST00000556867 DDAH1O94760 285 aa26.65■■□□□ 1.86
TDP1-216ENST00000556867 TFRCP02786 760 aaKnown RBP26.65■■□□□ 1.86
TDP1-216ENST00000556867 LIFRP42702 1097 aa26.65■■□□□ 1.86
TDP1-216ENST00000556867 UBE2Q1Q7Z7E8 422 aa26.65■■□□□ 1.86
TDP1-216ENST00000556867 FGD4Q96M96 766 aa26.65■■□□□ 1.86
TDP1-216ENST00000556867 NRBP1Q9UHY1 535 aa26.65■■□□□ 1.86
TDP1-216ENST00000556867 MCM3APO60318 1980 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 ADCK5Q3MIX3 580 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 MAMDC4Q6UXC1 1216 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 ZNF654Q8IZM8 581 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 FAM133AQ8N9E0 248 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 MAP3K14Q99558 947 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 JMJD4Q9H9V9 463 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 CYP39A1Q9NYL5 469 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 OGDHLQ9ULD0 1010 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 LCTP09848 1927 aa26.64■■□□□ 1.86
TDP1-216ENST00000556867 SYNGAP1Q96PV0 1343 aa26.64■■□□□ 1.85
TDP1-216ENST00000556867 POTEB2H3BUK9 544 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms