RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 PFASO15067 1338 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 TNKSO95271 1327 aa9.54□□□□□ -0.88
VTI1B-206ENST00000556461 ZNFX1Q9P2E3 1918 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 H0YGN5 161 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 ALAS1P13196 640 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 SEC23AQ15436 765 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 DGKHQ86XP1 1220 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 ANKLE1Q8NAG6 615 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 CHST13Q8NET6 341 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 DPF3Q92784 378 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 MAP4K1Q92918 833 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 PURBQ96QR8 312 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 TINF2Q9BSI4 451 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 ESYT1Q9BSJ8 1104 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 KRT23Q9C075 422 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 UBA5Q9GZZ9 404 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 LSG1Q9H089 658 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 RNF146Q9NTX7 359 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 DIS3Q9Y2L1 958 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 RBM8AQ9Y5S9 174 aaKnown RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
VTI1B-206ENST00000556461 ASTN1O14525 1302 aa9.53□□□□□ -0.88
VTI1B-206ENST00000556461 SOWAHBA6NEL2 793 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 E7EWF7 191 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 SNAI1O95863 264 aaPredicted RBP9.52□□□□□ -0.89
VTI1B-206ENST00000556461 ZNF865P0CJ78 1059 aaPredicted RBP9.52□□□□□ -0.89
VTI1B-206ENST00000556461 FDX1P10109 184 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 COL6A1P12109 1028 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 CNTN2Q02246 1040 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 BMP2KLQ5H9B9 411 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 CHST3Q7LGC8 479 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 NECAB2Q7Z6G3 386 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 IQCA1Q86XH1 822 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 DDX11Q96FC9 970 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 CCDC136Q96JN2 1154 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 C11orf49Q9H6J7 331 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 A1CFQ9NQ94 594 aaKnown RBP9.52□□□□□ -0.89
VTI1B-206ENST00000556461 SLC5A4Q9NY91 659 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 CCPG1Q9ULG6 757 aa9.52□□□□□ -0.89
VTI1B-206ENST00000556461 NFIBO00712 420 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 SEPT4O43236 478 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 ICAM1P05362 532 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 CAPN2P17655 700 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 ANTXR2P58335 489 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 GJC2Q5T442 439 aaPredicted RBP9.51□□□□□ -0.89
VTI1B-206ENST00000556461 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 KAT14Q9H8E8 782 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
VTI1B-206ENST00000556461 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 TRIOBPQ9H2D6 2365 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 LAMA3Q16787 3333 aa9.51□□□□□ -0.89
VTI1B-206ENST00000556461 ALPK3Q96L96 1907 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 ADCY6O43306 1168 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 PTGS1P23219 599 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 NT5C2P49902 561 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-206ENST00000556461 LRRC26Q2I0M4 334 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 SLC35G1Q2M3R5 365 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 TKFCQ3LXA3 575 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 CCDC178Q5BJE1 867 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 IFIT1BQ5T764 474 aaKnown RBP9.5□□□□□ -0.89
VTI1B-206ENST00000556461 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-206ENST00000556461 MB21D2Q8IYB1 491 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-206ENST00000556461 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-206ENST00000556461 CYP39A1Q9NYL5 469 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 SYNGAP1Q96PV0 1343 aa9.5□□□□□ -0.89
VTI1B-206ENST00000556461 FRMPD3Q5JV73 1810 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 IFIT3O14879 490 aaKnown RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 SLC27A2O14975 620 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 EVI5O60447 810 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 MSCO60682 206 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 PGK1P00558 417 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 PARP1P09874 1014 aaKnown RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 TRDNQ13061 729 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 BAATQ14032 418 aaPredicted RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 NECTIN1Q15223 517 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 LRRC41Q15345 812 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 CDC37Q16543 378 aaPredicted RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 GPATCH4Q5T3I0 446 aaKnown RBP9.49□□□□□ -0.89
VTI1B-206ENST00000556461 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 NSMFQ6X4W1 530 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 SLC30A10Q6XR72 485 aa9.49□□□□□ -0.89
VTI1B-206ENST00000556461 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 325.3 ms