RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 SYAP1Q96A49 352 aaPredicted RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 HSPA12BQ96MM6 686 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 SH3GL3Q99963 347 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 MMTAG2Q9BU76 263 aaKnown RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 NOC4LQ9BVI4 516 aaKnown RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 SLKQ9H2G2 1235 aaPredicted RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 PANK3Q9H999 370 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 VEZTQ9HBM0 779 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 BAZ1AQ9NRL2 1556 aaPredicted RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 SUN2Q9UH99 717 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.76□□□□□ -1.65
GPHN-210ENST00000555668 MAPKBP1O60336 1514 aa4.76□□□□□ -1.65
GPHN-210ENST00000555668 CNTLNQ9NXG0 1405 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 YEATS2Q9ULM3 1422 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 TMCO5BA8MYB1 307 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 MYO1CO00159 1063 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 EXOC5O00471 708 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 PES1O00541 588 aaKnown RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 KINO60870 393 aaKnown RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 CBX7O95931 251 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 PGRP06401 933 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 C8AP07357 584 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 FAM200BP0CF97 657 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 IMPDH2P12268 514 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 TNNT1P13805 278 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 TFE3P19532 575 aaPredicted RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 U2AF2P26368 475 aaKnown RBP eCLIP4.75□□□□□ -1.652e-7■■■■□ 19.3
GPHN-210ENST00000555668 MAGEA9P43362 315 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 HNRNPH2P55795 449 aaKnown RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 RPL6Q02878 288 aaKnown RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 PDE4BQ07343 736 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 NEXNQ0ZGT2 675 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 NOLC1Q14978 699 aaKnown RBP eCLIP4.75□□□□□ -1.65
GPHN-210ENST00000555668 LONRF3Q496Y0 759 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 GET4Q7L5D6 327 aaPredicted RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 TMC4Q7Z404 712 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 APBB1IPQ7Z5R6 666 aaPredicted RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 ANKRD13AQ8IZ07 590 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 TMEM40Q8WWA1 233 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 PPM1EQ8WY54 764 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 COX4I2Q96KJ9 171 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 RMDN2Q96LZ7 410 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 DRC1Q96MC2 740 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 GBP4Q96PP9 640 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 LZTS2Q9BRK4 669 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 MAF1Q9H063 256 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 IQCGQ9H095 443 aaKnown RBP4.75□□□□□ -1.65
GPHN-210ENST00000555668 SEMA3GQ9NS98 782 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 CTNNA3Q9UI47 895 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 CAPN6Q9Y6Q1 641 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 CCDC88BA6NC98 1476 aa4.75□□□□□ -1.65
GPHN-210ENST00000555668 CGNL1Q0VF96 1302 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 ABCC9O60706 1549 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 H3BS24 57 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 SGSM2O43147 1006 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 CPP00450 1065 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 TPM1P09493 284 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 RDXP35241 583 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 KIR3DL1P43629 444 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 RBM5P52756 815 aaKnown RBP eCLIP4.74□□□□□ -1.65
GPHN-210ENST00000555668 FOXD4Q12950 439 aaPredicted RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 GPS2Q13227 327 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 TMED1Q13445 227 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 BMS1Q14692 1282 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 SLC6A19Q695T7 634 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 LEKR1Q6ZMV7 388 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 MMS22LQ6ZRQ5 1243 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 THAP5Q7Z6K1 395 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 CDH24Q86UP0 819 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 MRPL41Q8IXM3 137 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 RBM12BQ8IXT5 1001 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 ATL2Q8NHH9 583 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 C17orf50Q8WW18 174 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 JARID2Q92833 1246 aaPredicted RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 TMEM87BQ96K49 555 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 CFAP53Q96M91 514 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 ZNF396Q96N95 335 aaPredicted RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 AGAP3Q96P47 875 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 CARS2Q9HA77 564 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 ATP13A1Q9HD20 1204 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 TOMM22Q9NS69 142 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 IRAK4Q9NWZ3 460 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 FAM53CQ9NYF3 392 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 UTP6Q9NYH9 597 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 CPSF2Q9P2I0 782 aaKnown RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 MAGEC2Q9UBF1 373 aaPredicted RBP4.74□□□□□ -1.65
GPHN-210ENST00000555668 POLKQ9UBT6 870 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 TJP2Q9UDY2 1190 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 CTNND2Q9UQB3 1225 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 TLR6Q9Y2C9 796 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 PLEKHG2Q9H7P9 1386 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 RB1CC1Q8TDY2 1594 aa4.74□□□□□ -1.65
GPHN-210ENST00000555668 SPAG9O60271 1321 aaKnown RBP4.73□□□□□ -1.65
GPHN-210ENST00000555668 FHAD1B1AJZ9 1412 aa4.73□□□□□ -1.65
GPHN-210ENST00000555668 MYOM3Q5VTT5 1437 aa4.73□□□□□ -1.65
GPHN-210ENST00000555668 MIA2Q96PC5 1412 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms