RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 CRISPLD2Q9H0B8 497 aa16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 PAK6Q9NQU5 681 aaPredicted RBP16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 ISY1Q9ULR0 285 aaKnown RBP16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
NME1-NME2-203ENST00000555572 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 FDX1P10109 184 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 IRX3P78415 501 aaPredicted RBP16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 RTN1Q16799 776 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 KCTD1Q719H9 257 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 ANKRD13CQ8N6S4 541 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 GTF3C2Q8WUA4 911 aaPredicted RBP16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 SH2B1Q9NRF2 756 aaPredicted RBP16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 TPCN1Q9ULQ1 816 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 NR2E3Q9Y5X4 410 aa16.59■□□□□ 0.25
NME1-NME2-203ENST00000555572 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 FLOT1O75955 427 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 COG2Q14746 738 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 SLF1Q9BQI6 1058 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 FRMPD2Q68DX3 1309 aaPredicted RBP16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 RLFQ13129 1914 aa16.58■□□□□ 0.24
NME1-NME2-203ENST00000555572 PFKFB2O60825 505 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 RXRAP19793 462 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 SNX21Q969T3 373 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 COA7Q96BR5 231 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 DEFB118Q96PH6 123 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
NME1-NME2-203ENST00000555572 A0A0G2JMZ2 1700 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 A0A0C4DFX4 3053 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 GOLGA8HP0CJ92 632 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 DSG3P32926 999 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 ME3Q16798 604 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 TMTC3Q6ZXV5 915 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 STAG2Q8N3U4 1231 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
NME1-NME2-203ENST00000555572 CPLX1O14810 134 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 STK3Q13188 491 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 TTBK2Q6IQ55 1244 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 GTF3C6Q969F1 213 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 MORF4L1Q9UBU8 362 aa16.55■□□□□ 0.24
NME1-NME2-203ENST00000555572 A0A1W2PPC1 479 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 CDKL5O76039 1030 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 CDC27P30260 824 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 HERVK_113P62684 666 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 KIFC2Q96AC6 838 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 FBXO28Q9NVF7 368 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 PNMA2Q9UL42 364 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 PRR12Q9ULL5 1215 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 ADAMTS5Q9UNA0 930 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 COL6A3P12111 3177 aa16.54■□□□□ 0.24
NME1-NME2-203ENST00000555572 ZBED4O75132 1171 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 LARGE1O95461 756 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 IFNAR1P17181 557 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 SLC16A2P36021 539 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 SCRN1Q12765 414 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 TRAF1Q13077 416 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 P2RX7Q99572 595 aaKnown RBP16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 UBA5Q9GZZ9 404 aa16.53■□□□□ 0.24
NME1-NME2-203ENST00000555572 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.243e-7■■■■□ 22.3
NME1-NME2-203ENST00000555572 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms