RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ANTXR2P58335 489 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 KCTD2Q14681 263 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 MFSD14CQ5VZR4 134 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 OLFML2BQ68BL8 750 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 CHST3Q7LGC8 479 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
SNX6-203ENST00000555416 FGD4Q96M96 766 aa16.06■□□□□ 0.16
SNX6-203ENST00000555416 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
SNX6-203ENST00000555416 SLC27A2O14975 620 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 OAZ1P54368 228 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 LHX8Q68G74 356 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
SNX6-203ENST00000555416 UBAC1Q9BSL1 405 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
SNX6-203ENST00000555416 KAT14Q9H8E8 782 aa16.05■□□□□ 0.16
SNX6-203ENST00000555416 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
SNX6-203ENST00000555416 PLXNA1Q9UIW2 1896 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 CDC45O75419 566 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 FARP2O94887 1054 aaPredicted RBP16.04■□□□□ 0.16
SNX6-203ENST00000555416 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
SNX6-203ENST00000555416 FDX1P10109 184 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 CYBAP13498 195 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 COPB2P35606 906 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 NT5C2P49902 561 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 NECTIN1Q15223 517 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNX6-203ENST00000555416 ANO2Q9NQ90 1003 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
SNX6-203ENST00000555416 ALAS1P13196 640 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
SNX6-203ENST00000555416 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
SNX6-203ENST00000555416 DDX49Q9Y6V7 483 aaKnown RBP16.03■□□□□ 0.16
SNX6-203ENST00000555416 ICAM1P05362 532 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 CNGA1P29973 690 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 TRDNQ13061 729 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 SLC35G1Q2M3R5 365 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 ANO1Q5XXA6 986 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 NCOA7Q8NI08 942 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 PAWRQ96IZ0 340 aaKnown RBP16.02■□□□□ 0.16
SNX6-203ENST00000555416 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
SNX6-203ENST00000555416 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 A1CFQ9NQ94 594 aaKnown RBP16.02■□□□□ 0.16
SNX6-203ENST00000555416 SLC5A4Q9NY91 659 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
SNX6-203ENST00000555416 DIS3Q9Y2L1 958 aaKnown RBP16.02■□□□□ 0.16
SNX6-203ENST00000555416 FRMPD3Q5JV73 1810 aa16.01■□□□□ 0.15
SNX6-203ENST00000555416 ASTN1O14525 1302 aa16.01■□□□□ 0.15
SNX6-203ENST00000555416 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
SNX6-203ENST00000555416 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
SNX6-203ENST00000555416 ANKRD35Q8N283 1001 aa16.01■□□□□ 0.15
SNX6-203ENST00000555416 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
SNX6-203ENST00000555416 FBXO40Q9UH90 709 aa16.01■□□□□ 0.15
SNX6-203ENST00000555416 DDX20Q9UHI6 824 aaKnown RBP16.01■□□□□ 0.15
SNX6-203ENST00000555416 SOWAHBA6NEL2 793 aa16■□□□□ 0.15
SNX6-203ENST00000555416 NFIBO00712 420 aa16■□□□□ 0.15
SNX6-203ENST00000555416 SNAI1O95863 264 aaPredicted RBP16■□□□□ 0.15
SNX6-203ENST00000555416 TKFCQ3LXA3 575 aa16■□□□□ 0.15
SNX6-203ENST00000555416 GPATCH4Q5T3I0 446 aaKnown RBP16■□□□□ 0.15
SNX6-203ENST00000555416 RASEFQ8IZ41 740 aa16■□□□□ 0.15
SNX6-203ENST00000555416 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
SNX6-203ENST00000555416 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
SNX6-203ENST00000555416 LCTP09848 1927 aa16■□□□□ 0.15
SNX6-203ENST00000555416 MCM3APO60318 1980 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 PARP1P09874 1014 aaKnown RBP15.99■□□□□ 0.15
SNX6-203ENST00000555416 ZNF865P0CJ78 1059 aaPredicted RBP15.99■□□□□ 0.15
SNX6-203ENST00000555416 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 TMEM67Q5HYA8 995 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 ERICH6BQ5W0A0 696 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 MAMDC4Q6UXC1 1216 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 FAM133AQ8N9E0 248 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
SNX6-203ENST00000555416 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 CYP39A1Q9NYL5 469 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 MAD2L2Q9UI95 211 aa15.99■□□□□ 0.15
SNX6-203ENST00000555416 PFASO15067 1338 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 SEPT4O43236 478 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 PRC1O43663 620 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 TROAPQ12815 778 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 WTAPQ15007 396 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
SNX6-203ENST00000555416 NSMFQ6X4W1 530 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 JMJD4Q9H9V9 463 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
SNX6-203ENST00000555416 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms