RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 CNTNAP1P78357 1384 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 LAMB1P07942 1786 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 TRIM66O15016 1216 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 RAD21O60216 631 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 LMNB1P20700 586 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 EPS15P42566 896 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 SRBD1Q8N5C6 995 aaKnown RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 CASQ1P31415 396 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 LMAN1P49257 510 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 ADKP55263 362 aaKnown RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 CC2D1AQ6P1N0 951 aaPredicted RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 C10orf67Q8IYJ2 551 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 ZBED3Q96IU2 234 aaPredicted RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 FZD1Q9UP38 647 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 PPP2R2CQ9Y2T4 447 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 PHLPP2Q6ZVD8 1323 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
PRKCH-211ENST00000555082 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 MTA3Q9BTC8 594 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 PARD6BQ9BYG5 372 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
PRKCH-211ENST00000555082 IFNAR1P17181 557 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 PPP2R3AQ06190 1150 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 FUT2Q10981 343 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 SEPT2Q15019 361 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 SPECC1Q5M775 1068 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 TOGARAM2Q6ZUX3 1019 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 EFCAB8A8MWE9 144 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 ENTPD3O75355 529 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 SYKP43405 635 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 RASA3Q14644 834 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 ATL3Q6DD88 541 aa11.23□□□□□ -0.61
PRKCH-211ENST00000555082 CPLX2Q6PUV4 134 aaKnown RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-211ENST00000555082 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 FOXN1O15353 648 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 GPR162Q16538 588 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 ZSCAN26Q16670 478 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 DHX58Q96C10 678 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 H3BQF6 201 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 DDAH1O94760 285 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 GH2P01242 217 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 KRT40Q6A162 431 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 UBA5Q9GZZ9 404 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 HACL1Q9UJ83 578 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 A0A0U1RQJ8 604 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 MYO1BO43795 1136 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 CDKL5O76039 1030 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 MYL5Q02045 173 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 MTF1Q14872 753 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 PKN1Q16512 942 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
PRKCH-211ENST00000555082 MTMR14Q8NCE2 650 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 EHD4Q9H223 541 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 VAT1LQ9HCJ6 419 aa11.22□□□□□ -0.61
PRKCH-211ENST00000555082 ARFGAP3Q9NP61 516 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms