RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 GJA10Q969M2 543 aa16.77■□□□□ 0.28
XRCC3-211ENST00000555055 PPP1R13BQ96KQ4 1090 aa16.77■□□□□ 0.28
XRCC3-211ENST00000555055 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.27
XRCC3-211ENST00000555055 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.27
XRCC3-211ENST00000555055 TSPYL1Q9H0U9 437 aa16.77■□□□□ 0.27
XRCC3-211ENST00000555055 ZNF287Q9HBT7 754 aa16.77■□□□□ 0.27
XRCC3-211ENST00000555055 MTMR4Q9NYA4 1195 aa16.77■□□□□ 0.27
XRCC3-211ENST00000555055 FHOD1Q9Y613 1164 aa16.77■□□□□ 0.27
XRCC3-211ENST00000555055 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 TULP2O00295 520 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 TEX33O43247 280 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 TOP1P11387 765 aaKnown RBP16.76■□□□□ 0.27
XRCC3-211ENST00000555055 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 SLF2Q8IX21 1173 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 GDAQ9Y2T3 454 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 COL11A2P13942 1736 aaPredicted RBP16.76■□□□□ 0.27
XRCC3-211ENST00000555055 GNAQP50148 359 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 AOC3Q16853 763 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 PDXDC2PQ6P474 469 aa16.76■□□□□ 0.27
XRCC3-211ENST00000555055 ARGLU1Q9NWB6 273 aaPredicted RBP16.76■□□□□ 0.27
XRCC3-211ENST00000555055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 8.1
XRCC3-211ENST00000555055 TPM1P09493 284 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 CRKP46108 304 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 GABPAQ06546 454 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 SEC63Q9UGP8 760 aaKnown RBP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 DDTLA6NHG4 134 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 ZRANB2O95218 330 aaKnown RBP eCLIP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 SHMT1P34896 483 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 PDE6BP35913 854 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
XRCC3-211ENST00000555055 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
XRCC3-211ENST00000555055 STAT6P42226 847 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 SNAP25P60880 206 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 EN1Q05925 392 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 UBE2SQ16763 222 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 IQUBQ8NA54 791 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 V9GYY5 206 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 PLSCR1O15162 318 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 ZNF18P17022 549 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 CLCN6P51797 869 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 NAALADL2Q58DX5 795 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 RRAGBQ5VZM2 374 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 DTHD1Q6ZMT9 781 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 VSTM4Q8IW00 320 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
XRCC3-211ENST00000555055 TMX4Q9H1E5 349 aaPredicted RBP16.74■□□□□ 0.27
XRCC3-211ENST00000555055 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 PPP1R3GB7ZBB8 358 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 BMP15O95972 392 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-211ENST00000555055 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
XRCC3-211ENST00000555055 TECP42680 631 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 ETF1P62495 437 aaKnown RBP16.73■□□□□ 0.27
XRCC3-211ENST00000555055 CCDC148Q8NFR7 591 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 SH3GLB2Q9NR46 395 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 ECE2O60344 883 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 GDF11O95390 407 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 FAM177A1Q8N128 213 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-211ENST00000555055 ENOX1Q8TC92 643 aaKnown RBP16.73■□□□□ 0.27
XRCC3-211ENST00000555055 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 ZMYND12Q9H0C1 365 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
XRCC3-211ENST00000555055 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 MYO1BO43795 1136 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 PPP1R11O60927 126 aaPredicted RBP16.72■□□□□ 0.27
XRCC3-211ENST00000555055 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
XRCC3-211ENST00000555055 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 HPS3Q969F9 1004 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 UBXN6Q9BZV1 441 aa16.72■□□□□ 0.27
XRCC3-211ENST00000555055 SCAF8Q9UPN6 1271 aaKnown RBP16.72■□□□□ 0.27
XRCC3-211ENST00000555055 SLX4Q8IY92 1834 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 TDP2O95551 362 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 UBA7P41226 1012 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 TXKP42681 527 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 SYT10Q6XYQ8 523 aa16.71■□□□□ 0.27
XRCC3-211ENST00000555055 DISC1Q9NRI5 854 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms