RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 GADL1Q6ZQY3 521 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 ZNF396Q96N95 335 aaPredicted RBP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 HOXC10Q9NYD6 342 aa12.03□□□□□ -0.48
TMEM55B-205ENST00000554028 UTRNP46939 3433 aa12.02□□□□□ -0.48
TMEM55B-205ENST00000554028 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 STXBP3O00186 592 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 IRF6O14896 467 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 TOMM70O94826 608 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 HUNKP57058 714 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 COG2Q14746 738 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 SLC35G1Q2M3R5 365 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 ATL3Q6DD88 541 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 DIS3L2Q8IYB7 885 aaKnown RBP12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 KCNH4Q9UQ05 1017 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.49
TMEM55B-205ENST00000554028 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 A0A0G2JLL6 359 aaPredicted RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 KIF3CO14782 793 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 CETPP11597 493 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 PTMSP20962 102 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 GTF2A2P52657 109 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 KIF23Q02241 960 aaPredicted RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 RESTQ13127 1097 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 CST9Q5W186 159 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 PRRT2Q7Z6L0 340 aaPredicted RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 ZNF784Q8NCA9 323 aaPredicted RBP12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 COA7Q96BR5 231 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 DOCK1Q14185 1865 aa12.01□□□□□ -0.49
TMEM55B-205ENST00000554028 ESYT2A0FGR8 921 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 BTBD18B2RXH4 712 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 BAG4O95429 457 aaKnown RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 ZBTB48P10074 688 aaPredicted RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 OSBPP22059 807 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.492e-7■■■■□ 24.6
TMEM55B-205ENST00000554028 ADCY7P51828 1080 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 KRT85P78386 507 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 IRX3P78415 501 aaPredicted RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 FSTL1Q12841 308 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 FOXD4L6Q3SYB3 417 aaPredicted RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 CCDC174Q6PII3 467 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 FOXD4L3Q6VB84 417 aaPredicted RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 CLEC17AQ6ZS10 378 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 CUL5Q93034 780 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 WNK4Q96J92 1243 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 RANBP17Q9H2T7 1088 aaKnown RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 FBXO28Q9NVF7 368 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
TMEM55B-205ENST00000554028 MYPNQ86TC9 1320 aa12□□□□□ -0.49
TMEM55B-205ENST00000554028 MYH4Q9Y623 1939 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 ICAM1P05362 532 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 HOXA7P31268 230 aaPredicted RBP11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 CLCN6P51797 869 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 SNAP25P60880 206 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 DGKZQ13574 1117 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 USH1GQ495M9 461 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 DAGLBQ8NCG7 672 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 CCPG1Q9ULG6 757 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 ABT1Q9ULW3 272 aaKnown RBP11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 AGTPBP1Q9UPW5 1226 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 ABCB11O95342 1321 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 PAPPA2Q9BXP8 1791 aa11.99□□□□□ -0.49
TMEM55B-205ENST00000554028 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 TMEM88BA6NKF7 163 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 VWA5AO00534 786 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 OAZ1P54368 228 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 RILPL1Q5EBL4 403 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 SPRYD7Q5W111 196 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms