RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 DYNLL2Q96FJ2 89 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 TEX13BQ9BXU2 312 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 KATNBL1Q9H079 304 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
ABCD4-220ENST00000553998 MTIF3Q9H2K0 278 aaKnown RBP9.25□□□□□ -0.93
ABCD4-220ENST00000553998 NKX2-4Q9H2Z4 354 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ABHD16BQ9H3Z7 469 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ATP8A2Q9NTI2 1148 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ECHDC1Q9NTX5 307 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 RIPK3Q9Y572 518 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 REV3LO60673 3130 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 TTC41PQ6P2S7 1318 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ZNF532Q9HCE3 1301 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 CABYRO75952 493 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 C6orf222P0C671 652 aaPredicted RBP9.24□□□□□ -0.93
ABCD4-220ENST00000553998 IGFBP4P22692 258 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 CYP2C18P33260 490 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
ABCD4-220ENST00000553998 CCDC144BQ3MJ40 725 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 C16orf86Q6ZW13 317 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 FGD4Q96M96 766 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
ABCD4-220ENST00000553998 SPC25Q9HBM1 224 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
ABCD4-220ENST00000553998 PCDHA11Q9Y5I1 949 aa9.24□□□□□ -0.93
ABCD4-220ENST00000553998 TRANK1O15050 2925 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 MX1P20591 662 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 GNASQ5JWF2 1037 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 B4GALNT3Q6L9W6 998 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 PRPF38AQ8NAV1 312 aaKnown RBP9.23□□□□□ -0.93
ABCD4-220ENST00000553998 DDX11Q96FC9 970 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 NECAB3Q96P71 396 aaPredicted RBP9.23□□□□□ -0.93
ABCD4-220ENST00000553998 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 PPP1R12CQ9BZL4 782 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 ZHX1Q9UKY1 873 aaPredicted RBP9.23□□□□□ -0.93
ABCD4-220ENST00000553998 COG5Q9UP83 839 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 SALL3Q9BXA9 1300 aa9.23□□□□□ -0.93
ABCD4-220ENST00000553998 BAZ2AQ9UIF9 1905 aaKnown RBP9.23□□□□□ -0.93
ABCD4-220ENST00000553998 SMIM22K7EJ46 135 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 PRKAB2O43741 272 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 TLL1O43897 1013 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 GPR37L1O60883 481 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 PDE1AP54750 535 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 TFF2Q03403 129 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 FAM83BQ5T0W9 1011 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 SNRNP48Q6IEG0 339 aaKnown RBP9.22□□□□□ -0.93
ABCD4-220ENST00000553998 RPUSD2Q8IZ73 545 aaKnown RBP9.22□□□□□ -0.93
ABCD4-220ENST00000553998 VTI1AQ96AJ9 217 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 HAUS7Q99871 368 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 NOC4LQ9BVI4 516 aaKnown RBP9.22□□□□□ -0.93
ABCD4-220ENST00000553998 HIPK3Q9H422 1215 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 EPHX3Q9H6B9 360 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 NYAP2Q9P242 653 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 FBXO40Q9UH90 709 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
ABCD4-220ENST00000553998 MTCH2Q9Y6C9 303 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 GRIN2DO15399 1336 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 SMCHD1A6NHR9 2005 aa9.22□□□□□ -0.93
ABCD4-220ENST00000553998 PIEZO1Q92508 2521 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 USP17L12C9JPN9 530 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 USP17L21D6R901 530 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 F5H6K3 240 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 KCNQ1P51787 676 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 OAZ1P54368 228 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 KLRC3Q07444 240 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 ITGA7Q13683 1181 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.94
ABCD4-220ENST00000553998 ARMCX2Q7L311 632 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 OTOP2Q7RTS6 562 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 CHST13Q8NET6 341 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 OTUD7AQ8TE49 926 aaPredicted RBP9.21□□□□□ -0.94
ABCD4-220ENST00000553998 MKL1Q969V6 931 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 AGBL1Q96MI9 1066 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 BCL11AQ9H165 835 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 WNT8AQ9H1J5 351 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 BOLA2Q9H3K6 86 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 ARMT1Q9H993 441 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 SYNPO2Q9UMS6 1093 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 Q9Y3F1 56 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 HCN4Q9Y3Q4 1203 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 SLC4A7Q9Y6M7 1214 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 ASTN1O14525 1302 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 UMODL1Q5DID0 1318 aa9.21□□□□□ -0.94
ABCD4-220ENST00000553998 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 ZBED4O75132 1171 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PFKMP08237 780 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 MYOGP15173 224 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 ADD2P35612 726 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 RABGGTBP53611 331 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 UBE3CQ15386 1083 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 TMEM31Q5JXX7 168 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms