RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 TRPV1Q8NER1 839 aa16.69■□□□□ 0.26
PRKCH-207ENST00000553831 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
PRKCH-207ENST00000553831 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
PRKCH-207ENST00000553831 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
PRKCH-207ENST00000553831 CYBAP13498 195 aa16.68■□□□□ 0.26
PRKCH-207ENST00000553831 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
PRKCH-207ENST00000553831 CAPN2P17655 700 aa16.68■□□□□ 0.26
PRKCH-207ENST00000553831 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
PRKCH-207ENST00000553831 RNF146Q9NTX7 359 aa16.68■□□□□ 0.26
PRKCH-207ENST00000553831 FBXO40Q9UH90 709 aa16.68■□□□□ 0.26
PRKCH-207ENST00000553831 DNAJC25-GNG10A0A024R161 153 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 CDC45O75419 566 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 GOLGA8HP0CJ92 632 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 ALAS1P13196 640 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 SEC23AQ15436 765 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
PRKCH-207ENST00000553831 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
PRKCH-207ENST00000553831 LHX8Q68G74 356 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
PRKCH-207ENST00000553831 ANKRD35Q8N283 1001 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 DIS3LQ8TF46 1054 aaKnown RBP16.67■□□□□ 0.26
PRKCH-207ENST00000553831 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 ACAD9Q9H845 621 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 OGDHLQ9ULD0 1010 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 CCPG1Q9ULG6 757 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 DIS3Q9Y2L1 958 aaKnown RBP16.67■□□□□ 0.26
PRKCH-207ENST00000553831 PLXNA1Q9UIW2 1896 aa16.67■□□□□ 0.26
PRKCH-207ENST00000553831 ICAM1P05362 532 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 CNGA1P29973 690 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 PRAMEF19Q5SWL8 479 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 TINF2Q9BSI4 451 aa16.66■□□□□ 0.26
PRKCH-207ENST00000553831 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
PRKCH-207ENST00000553831 SLC27A2O14975 620 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 SLC34A2O95436 690 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-207ENST00000553831 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 PRPF38BQ5VTL8 546 aaKnown RBP16.65■□□□□ 0.26
PRKCH-207ENST00000553831 CASC1Q6TDU7 716 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-207ENST00000553831 PAWRQ96IZ0 340 aaKnown RBP16.65■□□□□ 0.26
PRKCH-207ENST00000553831 FGD4Q96M96 766 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
PRKCH-207ENST00000553831 FRMPD3Q5JV73 1810 aa16.65■□□□□ 0.26
PRKCH-207ENST00000553831 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
PRKCH-207ENST00000553831 ANTXR2P58335 489 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 UBA5Q9GZZ9 404 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
PRKCH-207ENST00000553831 SEPT4O43236 478 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 MSCO60682 206 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
PRKCH-207ENST00000553831 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 ANO1Q5XXA6 986 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 NECAB2Q7Z6G3 386 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 HTATIP2Q9BUP3 242 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 SYNGAP1Q96PV0 1343 aa16.63■□□□□ 0.25
PRKCH-207ENST00000553831 SMCHD1A6NHR9 2005 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 ERICH2A1L162 156 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 WTAPQ15007 396 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
PRKCH-207ENST00000553831 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 MAMDC4Q6UXC1 1216 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 ZNF467Q7Z7K2 595 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-207ENST00000553831 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
PRKCH-207ENST00000553831 FAM133AQ8N9E0 248 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 PFASO15067 1338 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
PRKCH-207ENST00000553831 NFIBO00712 420 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-207ENST00000553831 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-207ENST00000553831 COL9A3Q14050 684 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-207ENST00000553831 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-207ENST00000553831 TMEM67Q5HYA8 995 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 NSMFQ6X4W1 530 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 STAG2Q8N3U4 1231 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 DPF3Q92784 378 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 CEP290O15078 2479 aa16.61■□□□□ 0.25
PRKCH-207ENST00000553831 SOWAHBA6NEL2 793 aa16.6■□□□□ 0.25
PRKCH-207ENST00000553831 USH1GQ495M9 461 aa16.6■□□□□ 0.25
PRKCH-207ENST00000553831 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
PRKCH-207ENST00000553831 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-207ENST00000553831 MAD2L2Q9UI95 211 aa16.6■□□□□ 0.25
PRKCH-207ENST00000553831 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-207ENST00000553831 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
PRKCH-207ENST00000553831 ASTN1O14525 1302 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms