RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 TMTC2Q8N394 836 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 TRIB2Q92519 343 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 MMP19Q99542 508 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 LRRC2Q9BYS8 371 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 CENPFP49454 3210 aa13.87□□□□□ -0.19
TMEM253-202ENST00000553744 DDAH1O94760 285 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 HMGCRP04035 888 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 INHAP05111 366 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 ICAM1P05362 532 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 SLC4A3P48751 1232 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
TMEM253-202ENST00000553744 KCTD2Q14681 263 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 GRM4Q14833 912 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 TKFCQ3LXA3 575 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 DHX32Q7L7V1 743 aaKnown RBP13.86□□□□□ -0.19
TMEM253-202ENST00000553744 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 CHST13Q8NET6 341 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
TMEM253-202ENST00000553744 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 BIN2Q9UBW5 565 aaPredicted RBP13.86□□□□□ -0.19
TMEM253-202ENST00000553744 FBXO40Q9UH90 709 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
TMEM253-202ENST00000553744 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
TMEM253-202ENST00000553744 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
TMEM253-202ENST00000553744 COBLO75128 1261 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 MTFR1Q15390 333 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 CCL14Q16627 93 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 DPP9Q86TI2 863 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 NPLOC4Q8TAT6 608 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 TCEANC2Q96MN5 208 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 MAP3K14Q99558 947 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 RNF146Q9NTX7 359 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
TMEM253-202ENST00000553744 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
TMEM253-202ENST00000553744 ALAS1P13196 640 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
TMEM253-202ENST00000553744 PSMA5P28066 241 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 TRIM32Q13049 653 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
TMEM253-202ENST00000553744 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 PNMA2Q9UL42 364 aa13.84□□□□□ -0.19
TMEM253-202ENST00000553744 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.19
TMEM253-202ENST00000553744 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
TMEM253-202ENST00000553744 PGK2P07205 417 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 CCL5P13501 91 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 CPA1P15085 419 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 MAP3K21Q5TCX8 1036 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 OLFML2BQ68BL8 750 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 CTCFLQ8NI51 663 aaPredicted RBP13.83□□□□□ -0.2
TMEM253-202ENST00000553744 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 BRCA2P51587 3418 aa13.83□□□□□ -0.2
TMEM253-202ENST00000553744 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 IGHA2P01877 340 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 CALM1P0DP23 149 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 CALM2P0DP24 149 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 CALM3P0DP25 149 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
TMEM253-202ENST00000553744 KIF5BP33176 963 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 SLC35G1Q2M3R5 365 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 ZNF792Q3KQV3 632 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 MFSD14CQ5VZR4 134 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 APOA5Q6Q788 366 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 MAML3Q96JK9 1138 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
TMEM253-202ENST00000553744 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
TMEM253-202ENST00000553744 PFASO15067 1338 aa13.82□□□□□ -0.2
TMEM253-202ENST00000553744 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
TMEM253-202ENST00000553744 CYTH3O43739 400 aa13.81□□□□□ -0.2
TMEM253-202ENST00000553744 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
TMEM253-202ENST00000553744 RXRAP19793 462 aa13.81□□□□□ -0.2
TMEM253-202ENST00000553744 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
TMEM253-202ENST00000553744 USH1GQ495M9 461 aa13.81□□□□□ -0.2
TMEM253-202ENST00000553744 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
TMEM253-202ENST00000553744 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms